| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2311 |
|---|
| Symbol | |
|---|
| ID | 6201726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 2643984 |
|---|
| End bp | 2645489 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641706296 |
|---|
| Product | amidophosphoribosyltransferase |
|---|
| Protein accession | YP_001833413 |
|---|
| Protein GI | 182679267 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
|---|
| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.672659 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAG TGAGCGATTT GCCGTCGGAC CTCGATCCCT CTTATTCCGC CTCCGACCCA
GGCGCCTTCG ATCTCGACGC CGATCGGCTG CGTGAGGAAT GCGGCGTATT CGGCATTTTC
GGTCATCCCG ATGCCGCGGC CATTACCGCG CTCGGCTTGC ATGCCCTGCA GCATCGCGGG
CAGGAAGCGG CCGGTATCGT CACTTTCGAG GGGACACGCT TCCATTCCGA GCGGCGGCTC
GGCCTCGTTG GCGATCATTT CTCCTCCGCC TCGACCATCG AACGCTTGCC AGGCTCTGTG
GCCATAGGCC ATGTGCGCTA TTCGACAACC GGCGAGACAA TCCTGCGCAA TGTGCAACCG
CTCTTCGCGG AACTCAGTTC CGGCGGCTTC GCCGTCGCCC ATAACGGCAA TCTGACCAAT
GGTCTCACCT TGCGCCGCGA CCTTGTACGG GAAGGCGCCA TCTATCAATC TACTTCTGAT
ACGGAAGTCA TCCTGCATCT CGTCGCGCGC AGCCGCAAGC CGCGTCTGGT CCAGCGTTTC
ATCGAGGCGT TAGGCACGAT CGAAGGCGCC TATGCGCTGG TCGCCATCTC CAACAAAAAA
CTGATCGGAG CTCGCGATCC GCTCGGCATC AGGCCGCTCG TCATCGGCCA ACTCGACGGC
CATTATATTC TCGCTTCAGA AACCTGCGCT CTCGACATTA TCGGCGCCCG TTTCGTCCGC
GATGTCGAGA ATGGCGAGGT CGTCATTATT TCCGAAAAGG GGATCGAAAG CCTGCGGCCT
TTCCCGCAGC GTCCCATGCG CCCCTGCATC TTTGAATATA TCTATTTCGC GCGGCCGGAT
TCGATCGTCC AGGGCCGTTC CGTCTATGCT GTGCGCAAGG CGATGGGCGC GGAACTGGCT
CGGGAAAGCA TGGTCGACGC CGATGTCGTC GTGCCGGTTC CTGATTCCGG CGTGCCAGCC
GCACTCGGCT TCGCGCAGCA ATCGGGCATT CCGTTCGAAC TCGGCATTAT CCGCAATCAT
TATGTCGGGC GCACCTTCAT TCAGCCGACC CAAACGGTGC GTGAACTCGG CGTGCGCCTC
AAGCACAGCG TCAATCGCTC GGTGGTCGAG GGCAAGCGCA TTGTTCTGCT CGATGATTCG
ATCGTGCGCG GCACAACCTC GGTCAAGATC GTGCAGATGA TGCGCGACGC TGGGGCGCGC
GAGGTGCATT TCCGCATTTC CTCGCCGCCG ATCTCCTATC CCGATTATTA CGGCATCGAC
ACGCCGGAAC GCGAAAAACT GCTCGCCGCC ACCCATTCGC TGGAGGAAAT GCGCGCCTAT
ATCGGCTCGG ATTCCCTGGC CTTTCTCTCG GTCGATGGCA TCTATCGCGC CATGGGCGAG
AACGGCCGCG ATCCCTTGCG CCCGCAATTC ACCGATCATT GTTTCACCGG CGATTATCCG
ACCGCCCTTA CCGATGTCAT GGGCGAGGCG AAAAACCAGC TCTCGCTGCT TGCAGAGGCC
AGCTAA
|
|---|
| Protein sequence | MDEVSDLPSD LDPSYSASDP GAFDLDADRL REECGVFGIF GHPDAAAITA LGLHALQHRG
QEAAGIVTFE GTRFHSERRL GLVGDHFSSA STIERLPGSV AIGHVRYSTT GETILRNVQP
LFAELSSGGF AVAHNGNLTN GLTLRRDLVR EGAIYQSTSD TEVILHLVAR SRKPRLVQRF
IEALGTIEGA YALVAISNKK LIGARDPLGI RPLVIGQLDG HYILASETCA LDIIGARFVR
DVENGEVVII SEKGIESLRP FPQRPMRPCI FEYIYFARPD SIVQGRSVYA VRKAMGAELA
RESMVDADVV VPVPDSGVPA ALGFAQQSGI PFELGIIRNH YVGRTFIQPT QTVRELGVRL
KHSVNRSVVE GKRIVLLDDS IVRGTTSVKI VQMMRDAGAR EVHFRISSPP ISYPDYYGID
TPEREKLLAA THSLEEMRAY IGSDSLAFLS VDGIYRAMGE NGRDPLRPQF TDHCFTGDYP
TALTDVMGEA KNQLSLLAEA S
|
|---|
| |