Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2178 |
Symbol | |
ID | 6200536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 2488792 |
End bp | 2489145 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641706167 |
Product | queuosine biosynthesis protein QueD |
Protein accession | YP_001833287 |
Protein GI | 182679141 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein [TIGR03367] queuosine biosynthesis protein QueD |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.371631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA CCCAAGCCTT TCATTTCGAG GCCGCCCATC GTTTGCCAAA AGTGCCGGAA GGCCATCGCT GCGCCAACTT GCACGGCCAT TCCTACCGCG TCGAACTGTA TCTCGAAGGA CCAGTCGATC CGGATACCGG CTTTGTTATC GACTTTTTCG ATATTGAAGC CGTTTTCGGC CCGTTGTTGC ACAGGCTCGA TCATCATTAT CTGAATGAGA TCGAAGGGCT CGAAAACCCA ACAGCCGAAC TCATCGCTGT CTGGATCTGG GACCGTGTCA AACCGTCACT GCCGCAACTC GTCAAGGTCA TCGTCTACGA GACACCAGAT TGTTGGGCTG AATACGAAGG GTGA
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Protein sequence | MKITQAFHFE AAHRLPKVPE GHRCANLHGH SYRVELYLEG PVDPDTGFVI DFFDIEAVFG PLLHRLDHHY LNEIEGLENP TAELIAVWIW DRVKPSLPQL VKVIVYETPD CWAEYEG
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