| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2024 |
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| Symbol | |
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| ID | 6200474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 2313243 |
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| End bp | 2314820 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641706011 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001833135 |
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| Protein GI | 182678989 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0689129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATA GAAAAAGCCT CACTCCGGCA ATATTTGCCA TTGTCTCTCT CAGCACTGGC
CTCGGTGGTT GTCTCTCTGT CGGTCCCGAT TATGTGGGGC CGGACCCGAT GCTTCCCGCG
AAGTCCTTTT ACGGGCCACC GGAACCGGCA GCGGCGGTCG CGGCCTTGCC ATCGCAAGGA
CCGGCCAAGG GGCCGGTGTC GCCAGTCGAT CCTCTCTGGT GGCGCACGTT CCGAGACCCC
ACTTTGACGT CGCTTGTACA AAGAGCAGCG GGTGCCAATC TGGACGTTCG TACAGCCTCG
ATGCGCTTGG CACAGAGTCG CTTTGAACGT GGTGTTACGG CTGCGGCCGC ATTGCCGACC
GGCAATGGCA ATGCAAGTTA TAATCGTCAG CAAATCAGTA ATCAGGGTGT TGTCACTCTG
GTTAATCCGC TCGTCCAACA ACTCGGCGTC GGTGCGTTTA CCGTGCCGCC AATCAATGTC
TGGTCGCCGA CATTCGATGC ATCCTGGGAA CTCGATATCT GGGGCCATGT ACGCCGGCAG
ATTGAAGCAG CAGATGCGCA AATGGATGCC GCCGAAGAAC AACGCCGCGC CATGCTTGTC
TCGACCATGG CGGAACTCGC GCGTGACTAC ATTCAATTGC GCGGGGTTCA GGCGCAGATT
GGCATCCTCA AAGACAATAT CGTGAGTTCC GAGGATATTC TGAAACTGAC CCGGACCCGG
GCCGAGAAAG GCATGACAAC AGGCCTTGAT GTCGAGAATG CTGCCGCACA GGTCGAAAGC
GAGAAAGCGC AATTGCCGAG CCTTGAGGAT CAGCAAATAG AGCTCATCAA TGCTCTAAGC
CTATTGCTGG ATAGCCCCCC TGGGGCCCTC AATGATGAGC TCATCAAATC GAAGCCCATC
CCTCCCGTGC CCCCACAGGT TCCGCTGGGC ATTCCTTCCG AACTCGCTCG CCGGCGCCCG
GATATTCGGC AGGCCGAAGC GCAACTCCAT TCAGCGACCG CCAATATTGG CGTCGCGGTG
GCGGAATTCT ATCCAACTGT CAAACTGAAT GGCAGCGTGG GTGCCAATGC CCTCGATTTC
AAGAATTTGT GGAAGCCGAG TGCATTGCAA TATAATTTTG GGCCGAGCTT TGCTGTTCCG
CTCTTCGACG GCGGCCGGTT GAAAGCGACT CTGCACTTGC GTGAGGCTCA GCAGCAGGAA
GCGGCGATCG CCTACCATAA GACCGTGCTC GGTGCCTGGC ATGAGGTGGT CAATACATTG
ACTGCTTATC AGAAAGAGCA GCAAAGGCGG GCGAGGCTCA ACGCGCAGGT CGATCATGCG
CGCCAAGTGC TTTCGCTCTC ACGCACACGC TATAATACAG GCGTCACCGA TTTCATTACC
GTGCTCGACG CGGAACGCAC GCTTCTTGGA GCGCAGCAGC AATATGCGCA GAGCACGACC
AATGTCTCGA CCGATCTCGT TGCCCTTTAC AAAGCACTCG GGGGTGGCTG GGAAATGGTG
TTTCCCGACA AGGATGCACC AACTCTGGCT ACGCCCGAGA TGACCGCTTC GGTGGCGCCG
GCTCCAGCGG CCCAATAG
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| Protein sequence | MADRKSLTPA IFAIVSLSTG LGGCLSVGPD YVGPDPMLPA KSFYGPPEPA AAVAALPSQG
PAKGPVSPVD PLWWRTFRDP TLTSLVQRAA GANLDVRTAS MRLAQSRFER GVTAAAALPT
GNGNASYNRQ QISNQGVVTL VNPLVQQLGV GAFTVPPINV WSPTFDASWE LDIWGHVRRQ
IEAADAQMDA AEEQRRAMLV STMAELARDY IQLRGVQAQI GILKDNIVSS EDILKLTRTR
AEKGMTTGLD VENAAAQVES EKAQLPSLED QQIELINALS LLLDSPPGAL NDELIKSKPI
PPVPPQVPLG IPSELARRRP DIRQAEAQLH SATANIGVAV AEFYPTVKLN GSVGANALDF
KNLWKPSALQ YNFGPSFAVP LFDGGRLKAT LHLREAQQQE AAIAYHKTVL GAWHEVVNTL
TAYQKEQQRR ARLNAQVDHA RQVLSLSRTR YNTGVTDFIT VLDAERTLLG AQQQYAQSTT
NVSTDLVALY KALGGGWEMV FPDKDAPTLA TPEMTASVAP APAAQ
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