Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1960 |
Symbol | |
ID | 6199147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 2235148 |
End bp | 2236365 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641705948 |
Product | polyhydroxyalkanoate depolymerase, intracellular |
Protein accession | YP_001833072 |
Protein GI | 182678926 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.258028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTACC AAACATATGA AGTGCAGGAG AACCTGCTCG ACCTGCTCAG GCCATTGGCT GCCACGGCAG GAAAGACACT GCGATCGCCA TACCCTGGGC TTGGGCAGGT TTGGCCAGCC AGTGAAATCG TCGGCATTTT AGAGACTTTC GCCAATCTTT CTGTGACGCA TGTGCGCCGC CCTTTTGCCA TCAACTCGGT TCTTGTGGGT GATCGCCGGG TCCCGGTGAC GGAAGAAATC GTCGCTTCGA CACCCTTTGC CACCCTCCTT CATTTCAAGA AGGAAACCAA CCTGCACCAG CAACGCGTTT TGGTGGTCGC CCCCATGTCA GGTCATTTTG CGACCCTGCT GCGCGCGATG ATCGAGACCG TTTTAGCTGA CCATGACGTC TATATCACGG ATTGGCACAA TGCACGCGAC GTCCCGCTGA GTGCGGGCAG ATTCGATCTC AGCACCTTTG TCGACCATGT AATCGATTTC CTGCGCATGA TGGGGGCGAG ATCGCATGTC ATCGCGGTAT GCCAACCATG CGTCCCCGTG CTCGCCGCAG CTGCCCTCAT GAACGAAGAC AAGGACGACG CACAGCCTTC CAGCATGACC TTGATGGCTG GACCGATCGA CACGCGCATC AATCCGACCA AGGTCAACGC ACTCGCGACC CAGCATCCAA TCGCCTGGTT CGAGCAGCAC CTGACGGATA AGGTGCCGCT CTGTTACAAG GGCGCACGAC GGGATGTCTA TCCGGGCTTT CTACAACTCA CGGCCTTTAT GAGCATGAAT TGGGACCGCC ATCTTCGCGC CTTCAAGGAT ATGGCGGAGG CGCGGGTGGC CAATGATCTG CCAAGACTTC AAGCCATTCA AACATTTTAT GATGAATATT TGACCGTTAT GGACTTGCCG GCCGAACTCT ATTTGCAAAC CATTCAATTG ATTTTTCAGG ATCACGCTTT ACCACGTGGC AAGCTCACGG TGCATGGCCG TCCAATCAAT CCCAAAGCTA TCAAACATAC CGCGCTCATG ACCGTTGAGG GTGAGCGAGA CGATATTTGC GGCCTCGGCC AAACGCTTGC TGCCCAGGAG CTTTGCTCGG GATTGAAACC CTATATGAAG TTCCATCATG TGCAGATGGG CGTTGGTCAT TATGGCGTCT TCGCCGGGCG ACGCTGGAGC ACTGAAATTT ATCCCAGAGT GCGTTACACC ATTCAAATGA CAAGCTGA
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Protein sequence | MIYQTYEVQE NLLDLLRPLA ATAGKTLRSP YPGLGQVWPA SEIVGILETF ANLSVTHVRR PFAINSVLVG DRRVPVTEEI VASTPFATLL HFKKETNLHQ QRVLVVAPMS GHFATLLRAM IETVLADHDV YITDWHNARD VPLSAGRFDL STFVDHVIDF LRMMGARSHV IAVCQPCVPV LAAAALMNED KDDAQPSSMT LMAGPIDTRI NPTKVNALAT QHPIAWFEQH LTDKVPLCYK GARRDVYPGF LQLTAFMSMN WDRHLRAFKD MAEARVANDL PRLQAIQTFY DEYLTVMDLP AELYLQTIQL IFQDHALPRG KLTVHGRPIN PKAIKHTALM TVEGERDDIC GLGQTLAAQE LCSGLKPYMK FHHVQMGVGH YGVFAGRRWS TEIYPRVRYT IQMTS
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