Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1804 |
Symbol | mdoD |
ID | 6200535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 2046342 |
End bp | 2047952 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641705794 |
Product | glucan biosynthesis protein D |
Protein accession | YP_001832921 |
Protein GI | 182678775 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.6877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.672061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAC GCAGGGATTT CCTGAAATTC ACCCTTGGCG GCGTCGCCAT GGGACAATTG GCTCCAGGCC TCGGCCGAGA CGGGAAGAAT ACTTCACCTT TTACTCTCGC CAGCAGCGCC AACGCCGAGG AAGCGACAAC ACCAGCTCCC AAAAGCCCAT CCTCCGGCTT TACCCTCGGC GAGGCCAAGC CCTTCGAGCC CGCCAATGTC ACGGAGGCCG CCCGCGCGCT TGCCCGTCAA GCCTATAAGC CGCTCCGTCA GCCGCTGCCG GATGTTTTCG CTGCGCTCAG CCATGATCAA TACGGCACCA TCTATGCGAA GCCGGGCACG GCCCTTTGGG CGGGAGACAA TCTCGGCTTC GCGATCGAGC CTCTGCATCG CGGCTTTATC TTCTCCGACC CCATGGAGAT CAATATTGTC GAGCATGGCG CCGCACGCCG CCTCGTCTAT GATCAGGCTC AATTCGCCTT TGGCAAACTC GCCGTGCCGA ACGCGATGGG AGATATTGGT TTTTCCGGGT TTCGGATCTT GGTGCCGCAA GATGCCCAGA ATTTCGGGGC GCTCGCGACC TTTCAAGGCG CCAGTTTTTT CCATGCGATA GCCCGCGGGC AGAGCGAGGG CGTGACCGCG CGAGCCCTAT CGATCAAAAC CGCCGATCCG CGCGGCGAGG AATTTCCGGC GATCCGCGCC ATCTGGATCG AAACCCCGAC CCTCGCCGAA AATGCCCTGA CGCTCCATGC CCTGATCGAT TCAGAAAGCG TTGCCGGCGC CTATCGCTTC ACCCTGCATC CCAGTGAAGC GACGATCATC GATACGGAAT GCACGCTTTT TGCCCGTACG AATGTCGACC GTTTCGGCCT TGCCACCATG ACCGGTGCGC ATCTTCTCGC GCCCGTCGAC CAACGCCATA TGGACGATCT GCGACCACAA GTCAGCGAAG TCGGCGGCCT TGCGATGCTG TCCGGCCGAG GCGAATGGCT GTGGCGGCCC GTGGCCAATC GCGAAACCTT GCAGATTTCC GTATTCACGG ACGAAAAACC GCATGGTTTT GGTTTTTTGC AGCGCGACCG TGCTTTTGAC GCTTTTCAGG ATGATTTTCA GCATTGGGAA ACACGCCCCT CCCTGTGGAT CGAACCGATC GGCGAATGGG CTGCCGGCGC CCTGCAATTG ATCGAAATCC CCTCGGATGC CGAGATTAAC GACAACATCC TTGCCTTTTG GCAGCCGCGT CAGGCCTTGG CACCGGGCAG CGAGACCTCC TTCGCCTACC GGCAATTCTG GTGCTGGACT CCCCCCGTCA GTCCTCCCCT GGCGATCACC ACGGCTTCGC GTCAAGGGCA TGGCTCAGCG GCGCGGCGGC GCCGTTTCCT TGTCCAGTTC ACAGGCCCCG GCCTCGCCGA TCCGCAAAAG ATCAAGGACG TGAAACCAAA TCTGACCGCC ACGCCGGGCA CGATCCTCGA CATGCGCACA TTCGCGCTGC CCGAACGGCA ATCCTATCGC ATTGTCTTCG AACTGGATCC CGGCACTGAA ACCACTTCGG AAATGCGCCT CGTGCTTGAG GTTGCGGGAG TTCCGATCAG CGAGACCTGG CTTTACCGAT GGACGCCCTG A
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Protein sequence | MIERRDFLKF TLGGVAMGQL APGLGRDGKN TSPFTLASSA NAEEATTPAP KSPSSGFTLG EAKPFEPANV TEAARALARQ AYKPLRQPLP DVFAALSHDQ YGTIYAKPGT ALWAGDNLGF AIEPLHRGFI FSDPMEINIV EHGAARRLVY DQAQFAFGKL AVPNAMGDIG FSGFRILVPQ DAQNFGALAT FQGASFFHAI ARGQSEGVTA RALSIKTADP RGEEFPAIRA IWIETPTLAE NALTLHALID SESVAGAYRF TLHPSEATII DTECTLFART NVDRFGLATM TGAHLLAPVD QRHMDDLRPQ VSEVGGLAML SGRGEWLWRP VANRETLQIS VFTDEKPHGF GFLQRDRAFD AFQDDFQHWE TRPSLWIEPI GEWAAGALQL IEIPSDAEIN DNILAFWQPR QALAPGSETS FAYRQFWCWT PPVSPPLAIT TASRQGHGSA ARRRRFLVQF TGPGLADPQK IKDVKPNLTA TPGTILDMRT FALPERQSYR IVFELDPGTE TTSEMRLVLE VAGVPISETW LYRWTP
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