| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1794 |
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| Symbol | |
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| ID | 6198687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 2032037 |
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| End bp | 2033680 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641705784 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001832911 |
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| Protein GI | 182678765 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.163596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.90828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGA CCGTAATCCA ATTCGTTCTC GAACGGCTGA AAGCCATCGG GATTTCGGAC
ATATTCGGTG TACCGGGCGA CTATTCCTTT CCCGTGAACG ATGCCATCTG CAATGATCCC
CACATTCGCT GGATCGGCTG TTCAAATGAA CTGAACGCCG CCTATGCCGC CGACGGTTAT
GCTCGCGTCA AAGGGGTCGC GGCTTTGTGC ACCACTTATG GCGTCGGTGA ATTGAGTGCG
TTGAACGGCG TGGCCGGGGC CTATGCTGAA CATCTGCCCA TTTTTCATCT CGTCGGCACA
CCCTCCATGG CGATTCAATC GGCCCGCGCG CCGATGCATC ATACTTTGGG CAATGGCGAA
TATGATCTGT TTCGACGTAT GACGGAATTA GTCGTCTGCG CTTATGCTGT CATGACGCCG
CAGAATGTTG CTTTCGAGAC GGAGCGGCTG ATCGCCGAGG CCCTGTTTCA TCGGCGTCCG
GTCTATATGG CCTTTCCTGC CGATCTCGCC GAGCAGCCCG TGCTCGGCAC AGCCGAACCC
CTCGCCGCAC CACGCAGCAA TCCCGATCAT CTCGCGCAAG CCACAACGGC CATTCTGAGC
GCTCTCGAGA AAGCGGAAAC GGCCTGTGTT CTGCCGGGCA ATTTAATCCA TCGCTGCGGA
TTGCAACGGA CGATGCAGAA CATCATCGAC CGTTCCGGCC TGCCCTTCGC GACAATGTTC
ATGGATAAAT CCGTCCTCGA CGAGCATCAG CCAGCCTTCG TCGGCATGTA TGATGGTGCG
TTGATGAACG ATGACGTCCG CCAATTCGTT GAAGATGCCG ATTGTGTGCT CACAATCGGC
ACACTCATGT CCGATCTCAA TAGCGGTGCC TTTACTGCCC GTCTCGATCC GGCGCGGACG
ATCACGATTG CCCATCACAA TGTGCTGTGC GATGGCAAGA CCTATATCGA TGTCGAAATG
GGTGACATTC TGCGCGCTCT GGCGGAGAAT GTGCCACACC GCGGCTGGAA GCGCATGAGC
GCCCCCTCGC TTGGCGCGGC AAAAGGCTCG GGTGACGACC CTATTGGTGT TGATGCGCTT
TATCCGCGCT GGGCGGATTT TCTCTCTCCC GGCGACATAT TGGTCGCCGA AACCGGTACG
GCATCCATGG GGCTCGGCTT CGCCCGCATG CCGAAGGGGG CCACCTTTTA CAACCAGACG
CTTTGGGGCT CGATCGGCTG GGCCACACCC GCAGCGGTCG GCGCCGCTAT TGCCGCGCCC
GGCCGCCGGG TCGTCCTGGT GACAGGCGAT GGCTCACATC AGATGACCGC GACGGAAATT
GGTCTCTTTG GTCATCTCGG TCTCAAACCC ATTGTTTTCG TGCTCAACAA TAACGGTTAT
CTGATCGAGC GGCTGCTCTG CAAAAATCCG GAAATTGCCT ATAATGACAT TGCGCCATGG
CGCTATAGCG AACTCCCGCA CGCACTTGGC TGCGATGGCT GGTTGACGGC GCGGGTGACC
ACATGCGCCG AACTGGATGC CGTGCTTGCG AAAGCCAAAC ATGCAGAGAC TGGTGTGTAT
ATTGAGATCG TGACGGATAC CTACGCAGCC TCGCCCTTGG CGATGAAGCT GCATGAAAAC
CTGAAGTCGC TCTACAAATC CTGA
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| Protein sequence | MTMTVIQFVL ERLKAIGISD IFGVPGDYSF PVNDAICNDP HIRWIGCSNE LNAAYAADGY
ARVKGVAALC TTYGVGELSA LNGVAGAYAE HLPIFHLVGT PSMAIQSARA PMHHTLGNGE
YDLFRRMTEL VVCAYAVMTP QNVAFETERL IAEALFHRRP VYMAFPADLA EQPVLGTAEP
LAAPRSNPDH LAQATTAILS ALEKAETACV LPGNLIHRCG LQRTMQNIID RSGLPFATMF
MDKSVLDEHQ PAFVGMYDGA LMNDDVRQFV EDADCVLTIG TLMSDLNSGA FTARLDPART
ITIAHHNVLC DGKTYIDVEM GDILRALAEN VPHRGWKRMS APSLGAAKGS GDDPIGVDAL
YPRWADFLSP GDILVAETGT ASMGLGFARM PKGATFYNQT LWGSIGWATP AAVGAAIAAP
GRRVVLVTGD GSHQMTATEI GLFGHLGLKP IVFVLNNNGY LIERLLCKNP EIAYNDIAPW
RYSELPHALG CDGWLTARVT TCAELDAVLA KAKHAETGVY IEIVTDTYAA SPLAMKLHEN
LKSLYKS
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