Gene Bind_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1742 
Symbol 
ID6199591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1971971 
End bp1973176 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content59% 
IMG OID641705733 
ProductABC-2 type transporter 
Protein accessionYP_001832861 
Protein GI182678715 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00338931 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGGCTT CTCCGCAGCC GGCCCCGCCG AAACCACCCG CGCCCACAGC CACGATGCCG 
CGCTCCTTTT GGGCAAAAAT TCTCCTCCAT ATCGAGAACA TTTTCCATCT CACGACGAAG
GAACTGCGCA GCATCCGCGC CGATCCCATC ATGCTGATCC TCGTCGTCTA TGCCTTCTCG
CTCGCCGTCT ATACGGTGGC CAATGGGGCC TCAACCGAGG CGCGCGACCT CACCATCGGC
ATCGTCGACG AGGACCATTC TGGCCTCTCG CGGCGCCTTC TGGATGCAAT GACACCGCCG
CTTTTCAAGA AAGCCGTCTC GATCACCGCC GATCAGATCG ATCCGATGAT GAATTCCGGC
GAACTCGTCT TCGTGCTCGA AATTCCCCCG CGCTTCGAGC AGGACCTTCT CACCGGACAC
CCGACATCGG TGCAATTGAA CGTCGATGCG ACGGCGATGA CGCAGGCCGG CAATGGCTCG
GTCTATATCC AGAACATCGT CATGAATGAG ACCGCCAAAT ATCTCATCTC TCGGGAGTTC
AACATCCCGC TGCCGGTCAA TTTCGTCACG CGCGTCAAGT TTAATCCCAA TCTCGATTCG
AGCTGGTTTA CTTCGGTGAT GCAAGTCGTG AACAATGTCA CCATGCTCAC GATCATTCTG
ACCGGCGCGG CGCTGATCCG CGAGCGCGAG CAGGGAACAG TCGAGCATCT GCTCGTCATG
CCGCTCCTGC CGGCCGAGAT CATGCTGTCG AAGATCATCG CCAACAGCCT CGTCATTCTC
ATCGCCGCAA CCTGCTCCCT CATTTTCGTG GTGCAATGGT GGCTACAGGT CCCAATTCCC
GGCTCGATTG CGCTGTTCTG CCTCGGAACC GCCGTCTATG CCATCACCGT TGCCGCCCTC
GGCATCGTGC TGGGAACCAT CGCTTCCACC ATGGGCCAGT TCGGCCTTCT CGTCATTCCT
GTCATGCTCA TCATGCAACT GCTTTCGGGC AGCACGACCC CGATGGAAAG CATGCCGTCC
TGGCTGCGTT ATCTGATGCA GGTCATCAGC CCGACGCCGC ATTTCGTTTC CTTCGCGCAG
GGCGTTCTCT ATCGCGGTGC TGATCTGACG ATTCTCTGGC CGGATCTCGC CGCGGTCGCC
GCCATCGGCA TCGCCTATTT CACCTTTTCC CTACGCCGCT TTCGCCACGT CATTTTCGGC
GCTTAG
 
Protein sequence
MVASPQPAPP KPPAPTATMP RSFWAKILLH IENIFHLTTK ELRSIRADPI MLILVVYAFS 
LAVYTVANGA STEARDLTIG IVDEDHSGLS RRLLDAMTPP LFKKAVSITA DQIDPMMNSG
ELVFVLEIPP RFEQDLLTGH PTSVQLNVDA TAMTQAGNGS VYIQNIVMNE TAKYLISREF
NIPLPVNFVT RVKFNPNLDS SWFTSVMQVV NNVTMLTIIL TGAALIRERE QGTVEHLLVM
PLLPAEIMLS KIIANSLVIL IAATCSLIFV VQWWLQVPIP GSIALFCLGT AVYAITVAAL
GIVLGTIAST MGQFGLLVIP VMLIMQLLSG STTPMESMPS WLRYLMQVIS PTPHFVSFAQ
GVLYRGADLT ILWPDLAAVA AIGIAYFTFS LRRFRHVIFG A