Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1472 |
Symbol | |
ID | 6200858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1677889 |
End bp | 1678767 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641705464 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001832597 |
Protein GI | 182678451 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.327977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.780269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGG CGACTTACGG AGACCGCAAA TATCATTTGA GCGAGCGGCT GGATCAAGCC GAATGGTCAT CTCTGCGTAT CGAGCGCCGG CATCTCGAAG CAGGCGCCCA GACGGCTCTC CCCACGGAAT GCACGGAAAT CGTCCTGATG CTCGCCGGGC GCGCGGGCGT GAGCCGCACC GGCAATGGCG AGACACAGGA CACGCTTGGA CGGCCTGGCA TGAGCTGGAT CGTTCCGTCC GGAACACAGG AAAGCCGGAT CGAACTTTTC GGCTCGATGG AATGCCTGCA CCTGTTCCTG CCCGCCACGC TCATCGACCA TAGCGCCCTG GCGGATTATG ACATCGATCC GGCCAAGGCG CAGATCGCCT ATGCGGGAGG GCTTTCCGAT CCGATGCTGC TTCAGATCGG ATTGACCTTT CGCAGCCTGC TCGATCGTCC CTCGCAGCCG ACCGATCGTC TCATTGTCGA TGGCATGCAG GCGGTGTTGG CGGGGCATCT GCTCGGCAGC TACGGCGTCC AGCAATGGCG TTCGACGGCC AGAGCCCCCT CCCTCGATCC CAGGCGACTG AAACGCGTGC TCGATTTCAT CGAGGCGCGT CTCGCGACGG ATATCGCGCT CGACGATCTG GCGGCCGAGG CCTGCCTCAG TCCGTTCCAC TTTTCCCGGT TGTTCAAGGA CGCGACCGGC TTGTCGCCGC ATCGTTACGT CACCGACCGC CGCGTCCAGG CTGCCCGTGA CAAGCTGGCA CTCAGACATT CGTCCCTGAT CGAAATCGCG CTCGATACCG GCTTCGGTTC TCAGGCCAAC TTCATTCGTG TGTTTCGCAA GGCGACCGGC CTGACGCCGG GCCAGTATCG CGATCTGCAT ATCCGCTAA
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Protein sequence | MTLATYGDRK YHLSERLDQA EWSSLRIERR HLEAGAQTAL PTECTEIVLM LAGRAGVSRT GNGETQDTLG RPGMSWIVPS GTQESRIELF GSMECLHLFL PATLIDHSAL ADYDIDPAKA QIAYAGGLSD PMLLQIGLTF RSLLDRPSQP TDRLIVDGMQ AVLAGHLLGS YGVQQWRSTA RAPSLDPRRL KRVLDFIEAR LATDIALDDL AAEACLSPFH FSRLFKDATG LSPHRYVTDR RVQAARDKLA LRHSSLIEIA LDTGFGSQAN FIRVFRKATG LTPGQYRDLH IR
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