Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1468 |
Symbol | |
ID | 6201371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1675030 |
End bp | 1675863 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641705460 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001832593 |
Protein GI | 182678447 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.875416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACCT GGTTCATCAC GGGTGCATCG CGTGGCTTTG GTGCGCGCAT TGCCGAACTG GCCCTCGCAC AGGGTGACAA CGTCGTCGCG ACGGCGCGCA ATCCAAAGAG CATCACGGAG CGCCTGGGCG ATCATCCCAA CCTGCTCGCC GTCGCGCTTG ACGTTACCGA CGAGGGACAG GCCAAGGTTG CTGCGCAGTC GGCGATCCAG CGCTTCGGAC AGATCGACGT GCTGCTCAAC AATGCCGGCT TCGGCCTGCT GGGCGCGGTC GAGGAAGCGA CCGCTGAAGA CGTCGAGAGG CTCTATCGAA CAAACGTGTT CGGCCTGCTT GCCGTCACGC GCGCGGTGCT GCCACATATG CGGGCAGTCC GCTCGGGACG CATCCTGAAT ATCTCTTCGA TTGGCGGTTA TCGGGCTGGA CCGGGCTTCG GCATCTACAG CTCGACCAAA TTCGCCGTGG AAGGCCTCTC GGAATCCCTT CGTGCCGAAC TTGCCCCGCT GGGTATTCAT GTCACAGTGA TCGAGCCAGG GTATTTCCGG ACCGATTTCC TCGACTCCAG CTCGCTTTCC GTCAGTGCGC ACCCGATCGC TGACTATGCC GATACGGCGG GCGCTGTAAG GACGCGCGCT GCGGATCTCA ACCACGCCCA ACCCGGCGAC CCGGACCGGC TGGCGCGGGT GATCGTCGAG TTCGTCGAAG CGCCCAACCC GCCCGTGCGC CTGCCGCTCG GCAGCGACAC CGTCGCCGCC ATAGAGGCCA AGCACGCATC TGACGCCAGC ATCCTCACCC AATGGCGACA CGTCTCGATC TCGACTGACT TCCCGCAGTC CTGA
|
Protein sequence | MKTWFITGAS RGFGARIAEL ALAQGDNVVA TARNPKSITE RLGDHPNLLA VALDVTDEGQ AKVAAQSAIQ RFGQIDVLLN NAGFGLLGAV EEATAEDVER LYRTNVFGLL AVTRAVLPHM RAVRSGRILN ISSIGGYRAG PGFGIYSSTK FAVEGLSESL RAELAPLGIH VTVIEPGYFR TDFLDSSSLS VSAHPIADYA DTAGAVRTRA ADLNHAQPGD PDRLARVIVE FVEAPNPPVR LPLGSDTVAA IEAKHASDAS ILTQWRHVSI STDFPQS
|
| |