| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1458 |
|---|
| Symbol | |
|---|
| ID | 6198519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 1665546 |
|---|
| End bp | 1666526 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641705451 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001832584 |
|---|
| Protein GI | 182678438 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.780601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGA AAAAATTGGC GCTCATCCTC GGCGCGACTG GTGGTTTTGG TCATGAAGTG
GCCAGTGCGC TTTTGCGCCG TGGCTGGCGC ATCAGGGCGG TCAACCGAAA CCCCGAGACA
GCAGCGGCGC GCTGCCATTT TCCGGCTGGA TCGGTCGAAT GGCGAAAGGG CGATGCGCTC
AATGAAGCGG AGATCATCGC CGCCGCCGAG GGCGCCAGCA TCATCGTCCA TGCGGCCAAT
CCCCCGCTCT ATCGAAACTG GCCCGGGCTC GTCATGCCCA TGCTGCGCAA TACGATCGAA
GCCGCGAGGC ATTCCGGTGC CCGCATCGTT TTGCCCGGCA GTATCTATAA TTTTCCCGTC
GATGGACCGC ATCTCCTGAA GGAAGACACG CCGCAGGAGG CCCCTTCACG CAAGGGAAAA
ATCCGCATCG AGGTGGAGAC AGCCTTGCGC GAGGCGCAAA AGGACGGCGT CAAATCGCTC
GTTCTGCGCG CCGGTGATTT CTTCGGGCCA AATGTGACGG CCAATAGCTG GATCAGCGCT
GTGGTCAAGC CGGGCCGGCC GATCCCCTCG ATCGCAGATC CAGGCCGTAG AGGCGTCGGC
CATGCCTGGG CCTATCTCCC CGATATGGCC GAGACGGTTG TGCAGCTTAT CGAGCAGGAA
GACAGGCTTG GCCTCCACGA GGTCTTTCAT TTCGGCGGCC ATTGGCTTGA GGATGATTGT
GAAATCATCC GCGCGATCCA GCGCGCCGCC GGCCCATCCC GCGTTAAAAT CCGCCGCTTT
CCCTGGTGGG CCGTGGGTCT GGCCTCGCCC TTCGTCCCTC TCATGCGAGA ACTCTGGGAA
ATGCGCTATC TCTGGAAGGT TCCGTTCAAG CTCGATAATG CCAAGCTCAC GACCTTTCTC
GGCAAAGAAC CGCATACGCC TCTCGAAGAA GCCGTGCGCA TTTCACTCAC CGGACTCGGC
TGCCTGCCAA AAGCCGATTA G
|
|---|
| Protein sequence | MSEKKLALIL GATGGFGHEV ASALLRRGWR IRAVNRNPET AAARCHFPAG SVEWRKGDAL
NEAEIIAAAE GASIIVHAAN PPLYRNWPGL VMPMLRNTIE AARHSGARIV LPGSIYNFPV
DGPHLLKEDT PQEAPSRKGK IRIEVETALR EAQKDGVKSL VLRAGDFFGP NVTANSWISA
VVKPGRPIPS IADPGRRGVG HAWAYLPDMA ETVVQLIEQE DRLGLHEVFH FGGHWLEDDC
EIIRAIQRAA GPSRVKIRRF PWWAVGLASP FVPLMRELWE MRYLWKVPFK LDNAKLTTFL
GKEPHTPLEE AVRISLTGLG CLPKAD
|
|---|
| |