Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1369 |
Symbol | rplF |
ID | 6200784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 1576284 |
End bp | 1576817 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641705365 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001832498 |
Protein GI | 182678352 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.622971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0841779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGTA TCGGAAAAAA GCCGGTCGTC ATTCCCGCTG GCGTGACAGC CAAGGTCGAA GGACAGGCCA TTTCGGTGAA GGGCGGCAAA GGCGAATTGC ATTTCACCGC GCCCGATTAT GTTTCTGTTG CTTTGGAAGG CACGCAGATT GCCGTCTCGC CGCGTTCTGA AGATAAAAAA GCCCGCGCGG CCTGGGGCAT GACCCGGTCG ATCGTGAATA ATCTGGTAAT CGGAGTCTCG CAGGGTTTTG AGCGCAAGCT CGAGATCACG GGTGTCGGCT ACAAGGCTGC GGTGCAAGGA AAGAATCTTC AACTTTCTCT GGGCTATAGC CACGATATTA GCTTTCCGAT TCCGGATGGA ATTGCGATTG CTGCGCCCAA GCCGACCGAG GTTTCGATCA CCGGGATCGA TAAGCAGCGG GTCGGGCAGA TTGCCGCTGA AATTCGGGCC CTGCGTCCGC CGGAACCCTA TAAGGGCAAG GGCGTGAAAT ATGCCGGGGA ATTCATCTTC CGTAAGGAAG GCAAGAAGAA ATAA
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Protein sequence | MSRIGKKPVV IPAGVTAKVE GQAISVKGGK GELHFTAPDY VSVALEGTQI AVSPRSEDKK ARAAWGMTRS IVNNLVIGVS QGFERKLEIT GVGYKAAVQG KNLQLSLGYS HDISFPIPDG IAIAAPKPTE VSITGIDKQR VGQIAAEIRA LRPPEPYKGK GVKYAGEFIF RKEGKKK
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