Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1222 |
Symbol | |
ID | 6200354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 1419030 |
End bp | 1419806 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641705216 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001832353 |
Protein GI | 182678207 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.461582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTCT ATCGTGCGAG ACCGAGAGAT GGTGTGGCCT GGGTCACGGG GGCCAGTTCC GGCATCGGGC GGGCTGTGGC CATGGAACTG GCGCGGCGAG GCTACAGGGT CGCTGCCACG GCGCGGCGCA AGGGTGATCT CGAGGATCTT GCCGCCGCCA TGCCGAATAT CATCAGCTTT CCGGGCGATG TGACCGATCT CGCTGGCATG CGGGCGATGG TCAAACGCAT TGAGCGTCAG CTTGGGCCTA TCGCGCTCGC CTTTTTCAAT GCTGGCGTCT ATTTCATTCA GGAGCGCAAG GGGCTGGCGG CGGAAATCGC GTGGCGGACT TTCGAGGTCA ATACGGGCGG CGTCCTGAAT TGCCTCGATC CTTTGCTGCC GGAAATGCGT CGAAGACGCT TTGGGCAGAT CGTTCTGAAT GCCTCGCTTG CAGGTTATGG CGGCATTCCG GGTTCGCTCG CCTATGGCGC GAGCAAGGCG GCTTTGATTT CACTCGCCGA AACCTTGAAG CTGACGGAAG AGCGGGCCGG GATCAATGTC CAGGTCGTCA ATCCGGGTTT CGTCGAAACG CCGATGACAG CTCCCAATGA TTTCTTCGAG ATGCCGTTCC TGATGGATGC CGATGGCGCC GCCAGAAGAA TCTGCGATGG ATTCGAAAGA GGCGGGTTCG AAATCACTTT CCCCAAGCGT CTTGCCTGGA GCTTCAAATT CGCCTGCCTG CTGCCTTATC CGCTGTTCTT TGCGATCATG CGGCGGGCGA CGCGGCGCGT GCAATAA
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Protein sequence | MAVYRARPRD GVAWVTGASS GIGRAVAMEL ARRGYRVAAT ARRKGDLEDL AAAMPNIISF PGDVTDLAGM RAMVKRIERQ LGPIALAFFN AGVYFIQERK GLAAEIAWRT FEVNTGGVLN CLDPLLPEMR RRRFGQIVLN ASLAGYGGIP GSLAYGASKA ALISLAETLK LTEERAGINV QVVNPGFVET PMTAPNDFFE MPFLMDADGA ARRICDGFER GGFEITFPKR LAWSFKFACL LPYPLFFAIM RRATRRVQ
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