Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1170 |
Symbol | |
ID | 6198709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1356309 |
End bp | 1356995 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641705163 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_001832301 |
Protein GI | 182678155 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.454656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGATT ATGCCTTCGC CGAAGCAGAG ATCGTCTCGC TTCTGTCCAT GTCGACAAGG CCGTTTCCGG TCCGCCGCAT TTTCTGCGTC GGCCAGAATT ATCGTGATCA CGCCAAGGAA ATGGGGAGCA ATCCCGAGAC CGAGGAGCCG TTCTTCTTCA TGAAGCCGCC GGGCGCCATA TTACAGAACG GCGAAACCAT GCCCTATCCG CCGGGCACCA ATGAATTGCA TCACGAGGTC GAACTCGTCG TCGCCCTGAA CATGGGCGGC AAGGATATTC CGCCCGAGAA GGTCAATGAC ATGATCTTCG GCTATGCGGT CGGACTCGAC ATGACCAAGC GCGACGTGCA GCGTGAGGCC AAGGCCAAGG GCCGTCCGTG GGAAATGAGC AAGGCTTTCG ACTTTTCCGC GCCCTGTTCC TCGATCAGCC CGGAAATGTA TACGGGGATC ATCACCAAGG GCAAAATTCA GCTCAAGGTC AATGGCGAGC TACGCCAAAA CAGCGATGTC TCCGAAATGA TCTGGGACGT GCCCCATATC GTCCATTATC TGTCGAAACA GGTCGAAATC CTGCCGGGCG ATCTGATCTT CACCGGCACG CCGGCTGGCG TCGGCCCCGT GGTCAAGGGT GACAAGATCG AAGCAACGAT TTCCGGCCTC GAACCCCTGA TCATCGAAAT CGGCTAA
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Protein sequence | MGDYAFAEAE IVSLLSMSTR PFPVRRIFCV GQNYRDHAKE MGSNPETEEP FFFMKPPGAI LQNGETMPYP PGTNELHHEV ELVVALNMGG KDIPPEKVND MIFGYAVGLD MTKRDVQREA KAKGRPWEMS KAFDFSAPCS SISPEMYTGI ITKGKIQLKV NGELRQNSDV SEMIWDVPHI VHYLSKQVEI LPGDLIFTGT PAGVGPVVKG DKIEATISGL EPLIIEIG
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