| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1123 |
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| Symbol | metH |
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| ID | 6198600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 1300067 |
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| End bp | 1303807 |
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| Gene Length | 3741 bp |
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| Protein Length | 1246 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641705115 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_001832254 |
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| Protein GI | 182678108 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.833597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGT CCCCTTTGAA TGGTCCCGCG ACGACCAAAG CGCTTCTGGA AGCGGCCGCC
GAGCGCGTTC TTGTGCTTGA TGGTGCCATG GGCACGATGA TCCAGCAGCG CAAATTTACC
GAGGCCGATT TTCGTGGCGA GCGTTTCAAG GACTGGCCTT CCGATCTGCG CGGCAATAAC
GATCTTCTGA CTCTGACCCA ACCGGACGCC ATCGTCGCCA TTCATCGCGC TTATTTCGAG
GCAGGCGCCG ATATTATCGG AACGAATACA TTCAACTCGA CCCGTATCTC CCAGGCCGAT
TACGGCATGG AGGAACTGGT TGCCGAATTG AACCGTGAAT CGGCGCGGCT CGCGCGTCAG
GCCGCCGATG AGGCTGAGGC AAAAGATGGT CGCCGCCGTT TCGTCGCCGG CGCTTTAGGA
CCGACCAACC GGACCGCCTC GATCTCGCCT GACGTCAATA ATCCAGGCTT TCGCGCGGTG
ACATTCGATG ATCTGCGCGC AGCCTATGCC GAGGCCGCAA GTGCATTGAT CGAGGGCGGC
GCGGATATCT TGATTGTCGA GACGATTTTC GACACGTTGA ATGCCAAGGC AGCGCTTGCC
GCGATCGACG ATGTATATGA ATCCTTGAAC GTGCGTCTGC CGGTGATGAT CTCCGGCACG
ATCACCGATC TTTCCGGCCG TACTCTGTCC GGCCAGACAC CGACTGCGTT CTGGTATTCG
CTGCGCCATG TGAAGCCCAT AACGATCGGC CTCAATTGCG CGCTGGGAGC GCGCGAGATG
CGCGCCCATA TTGCCGAATT GTCGCGCGTC GCGGATACAT TGATCTGCGC TTATCCTAAT
GCAGGCCTGC CCAATGAATT CGGCCTCTAT GATGAGAGCC CTGAATATAT GGCCTCGCTC
GTCGGTGAAT TTGCCGAGGC CGGTCTTGTC AATATTGTCG GGGGCTGCTG CGGCACGACA
CCGGCGCATA TTCACGCTAT TGCCAAGCGC GTCGCGGGCA TAGCGCCCCG TAAGATCCCA
GCCATTGAAC CTTTATTGCG GCTCTCGGGG CTTGAGCCTT TCACGCTCAC CAAGGACATT
CGCTTCGTCA ATGTCGGTGA ACGGACCAAT GTGACCGGCT CGGCGAAATT CCGTAAACTC
ATCAAGGAAG GCCAGTTTTC CGCCGCGCTT GATGTCGCGC GCGATCAGGT CGTCATGGGT
GCCCAGGTCA TCGACGTGAA TATGGACGAA GGCCTACTCG ATTCCGAAGC TGTCATGCGA
GATTTCCTCA ATCTCGTCGC TGCCGAACCC GACATAGCCC GTGTGCCGGT GATGATCGAT
TCCTCGAAAT TCGTGGTTAT CGAGGCTGGT CTCAAATGTA TTCAGGGCAA AGGCATCGTC
AATTCGATTT CCCTGAAGGA AGGTGAAGAG AATTTCATTC AAGCGGCCAA AGCCGTTCAT
CGTTATGGCG CGGCGGTCGT TGTCATGGCC TTCGATGAAC AAGGCCAGGC AGATACACGC
GCGCGGAAAG TCGAGATCTG TTCGCGTGCC TATGATATCC TCGTGAATCG GTGCGGCTTT
CCGCCCGAGG ATATTATCTT CGATCCGAAC ATTTTCGCGG TTGCGACCGG TATCGAGGAA
CACAATAATT ACGGCGTCGA TTTCATCGAG GCCACGCGGG AAATCCGCCA GAAATTTCCG
CTGGTGCATA TTTCCGGCGG TGTTTCCAAT CTCTCCTTCT CGTTTCGCGG CAATGAGCCG
GTGCGTCAGG CGATGCATTC GGTCTTTCTC TATCACGCCA TCGCGGCCGG CATGGATATG
GGTATCGTCA ATGCCGGACA GCTCTCGGTC TATGAAGAGC TTGATCCGGA GTTGCGCGAG
GCCTGCGAGG ATGTCGTTCT AAACCGGCGG CCAGAGGCAA CCGAACGACT TCTGGCTTTG
GCCGAGAATT ACAAGGGCCA AGGGACGGAG AAACAGGAAA AGAGCTTGGC CTGGCGCGAG
GAGCCAGTCG AAAAACGGCT CGAACATGCG CTCGTCAATG GCATTACCGA ATTTATCGAC
CAGGATGTCG AGGAAGCGCG TCTTGCCAGC ACGCGGACAC TCGATGTCAT CGAAGGGCCT
TTGATGGCCG GCATGAATGT CGTCGGCGAT CTCTTTGGCT CCGGCAAAAT GTTCCTGCCA
CAAGTCGTCA AATCGGCGCG TGTCATGAAG GCGGCGGTCG CCTATCTCAT GCCGTTCATG
GAAGCGGAAA AAGCCGCCAA TGGTGGCGCC GTGCGGTCGA GCGCCGGCAA GATTTTGATG
GCGACGGTCA AGGGCGATGT GCATGACATC GGCAAGAATA TCGTTGGCGT GGTGCTCGCT
TGTAATAATT ACGAGATCAT TGATCTTGGC GTCATGGTGC CGGCGGCGAA AATTCTTGAA
ACCGCGCGGG CGGAACAGGT TGATTGCATC GGCCTCTCCG GCCTGATCAC GCCTTCGCTC
GATGAAATGT GTTTCGTGGC CGCTGAGCTT GAGCGTGAAG GCTTCGATGT GCCCTTGCTG
ATCGGCGGCG CGACGACCAG CCGGGTGCAT ACGGCGGTCA AGATCCATCC CAATTATACA
CGCGGCCAAA CCGTCTATGT GACGGATGCG AGCCGCGCTG TGGGCACTGT GCAGTCCTTG
CTGTCGGAGA CCTCGCGCGG CGCCTATATT GAAACGATCC GTGCCGAATA TCAGAAGGTC
TCCGATGCCC ATCGGAGGGC CGAGGCCGAA AAGCAGCGCC TGCCTTTGCA ACGCGCGCGG
CAGAATGCCT TCCGGCCTGA TTGGGCGGCC TATCAGCCGC CGCGCCCGAC CTTTACCGGC
GCGCGTATTT TCGGCAGCTA TGATGTCGGC GAACTCGTCC CCTATATTGA TTGGACGCCT
TTCTTCCAGA CCTGGGAATT GCGCGGCCGT TATCCGGCTC TGCTCGATGA CCCAAAACAG
GGTGCCAGCG CGCGGCAGCT TTTCGACGAT GCTCAGGCCA TGCTCAAGCG CATTGTCGAG
GAACATTGGT TCGACCCCAA GGCCGTCATC GGTTTCTGGC CAGCCAATGC AGTGGATGAT
GACATCAAGC TCTATACGGG TGAATCGCGC TCGGAAGAGC TCGCGACTTT CTTCACCTTG
CGCCAGCAAT TGTCGAAACA GGGGGACAAG CCAAATCTCG CTTTGGCCGA TTTCGTCGCA
CCGCGTGATA GCGGCAAGGC GGATTATATC GGTGGCTTTG TGGTGACGGC CGGCGCGCGC
GAGGAGAAGA TCGCCGAGCG TTTCGCCAAG GCCAATGACG ATTATGGTTC GATCATGGTG
AAGGCGCTCG CCGATCGGAT TGCCGAAGCC TTTGCCGAGC GTATGCATGA ACGTGTGCGC
CGCGAATTCT GGGCCTATGC GCCGGATGAA AATCTGACCA ATGAAGAACG AATTTCGGAA
TCTTACCGTG GCATTCGGCC GGCGCCCGGT TATCCGGCTC AGCCCGATCA TTCGGAAAAG
GCGACTTTGT TCCGTCTGCT CGAAGCCGAA CGGCGGATCA GCGTCAGCCT GACGGAAAGC
TTCGCCATGT GGCCCGGCTC TTCGGTTTCT GGTCTCTATA TCGCTCAGCC CGAAGCCTAT
TATTTCGGTG TGGCCAAGGT CGAGCGTGAT CAGGTCGAGG ATTATGCGCG GCGCAAAGGC
ATGAGCATTG CGGAGGTCGA ACGCTGGCTG ACACCGATCC TCAATTACAA TCCAGCGGCC
GTGGCTGAGG CGGCGGAGTA G
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| Protein sequence | MSQSPLNGPA TTKALLEAAA ERVLVLDGAM GTMIQQRKFT EADFRGERFK DWPSDLRGNN
DLLTLTQPDA IVAIHRAYFE AGADIIGTNT FNSTRISQAD YGMEELVAEL NRESARLARQ
AADEAEAKDG RRRFVAGALG PTNRTASISP DVNNPGFRAV TFDDLRAAYA EAASALIEGG
ADILIVETIF DTLNAKAALA AIDDVYESLN VRLPVMISGT ITDLSGRTLS GQTPTAFWYS
LRHVKPITIG LNCALGAREM RAHIAELSRV ADTLICAYPN AGLPNEFGLY DESPEYMASL
VGEFAEAGLV NIVGGCCGTT PAHIHAIAKR VAGIAPRKIP AIEPLLRLSG LEPFTLTKDI
RFVNVGERTN VTGSAKFRKL IKEGQFSAAL DVARDQVVMG AQVIDVNMDE GLLDSEAVMR
DFLNLVAAEP DIARVPVMID SSKFVVIEAG LKCIQGKGIV NSISLKEGEE NFIQAAKAVH
RYGAAVVVMA FDEQGQADTR ARKVEICSRA YDILVNRCGF PPEDIIFDPN IFAVATGIEE
HNNYGVDFIE ATREIRQKFP LVHISGGVSN LSFSFRGNEP VRQAMHSVFL YHAIAAGMDM
GIVNAGQLSV YEELDPELRE ACEDVVLNRR PEATERLLAL AENYKGQGTE KQEKSLAWRE
EPVEKRLEHA LVNGITEFID QDVEEARLAS TRTLDVIEGP LMAGMNVVGD LFGSGKMFLP
QVVKSARVMK AAVAYLMPFM EAEKAANGGA VRSSAGKILM ATVKGDVHDI GKNIVGVVLA
CNNYEIIDLG VMVPAAKILE TARAEQVDCI GLSGLITPSL DEMCFVAAEL EREGFDVPLL
IGGATTSRVH TAVKIHPNYT RGQTVYVTDA SRAVGTVQSL LSETSRGAYI ETIRAEYQKV
SDAHRRAEAE KQRLPLQRAR QNAFRPDWAA YQPPRPTFTG ARIFGSYDVG ELVPYIDWTP
FFQTWELRGR YPALLDDPKQ GASARQLFDD AQAMLKRIVE EHWFDPKAVI GFWPANAVDD
DIKLYTGESR SEELATFFTL RQQLSKQGDK PNLALADFVA PRDSGKADYI GGFVVTAGAR
EEKIAERFAK ANDDYGSIMV KALADRIAEA FAERMHERVR REFWAYAPDE NLTNEERISE
SYRGIRPAPG YPAQPDHSEK ATLFRLLEAE RRISVSLTES FAMWPGSSVS GLYIAQPEAY
YFGVAKVERD QVEDYARRKG MSIAEVERWL TPILNYNPAA VAEAAE
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