Gene Bind_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1080 
Symbol 
ID6200219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1239883 
End bp1241013 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content59% 
IMG OID641705073 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_001832212 
Protein GI182678066 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.143277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC GCATTCAACA ATTCCTCCGC TCCCGCACGG AAGACGGCCC CTGCCTCGTC 
CTCGATCTCG AGGTGGTGCG CGACAATTAT CAAGCCTTCA GCAAGGCCCT GCCGGATACG
CGCGTTTTTT ATGCCGTAAA GGCCAATCCG GATCCGCAAG TCCTTGAACT CCTTGCCCGT
CTCGGCTCGT GCTTCGATAC CGCCTCGGTC GTCGAGATCC AGCAGGTCCT GGCCGCCGGC
GCCTCCGCCG ACCGGATCAG CTTTGGCAAT ACGATCAAGA AAGAGCGTGA CATCGCCCGC
GCCTATGCGC TCGGCGTCAG GCTCTTTGCC GTCGATTGTG AGGCCGAGGT CGAAAAGATC
GCCCGCGCTG CGCCTGGCTC GCGTGTCTTC TGCCGCATTC TCTGCGATGG AGAAGGCGCG
GAATGGCCGC TGTCCCGCAA GTTCGGCTGC GCGCCGTCGC TGGCGCCGCG CGTGCTGGAA
CATGCCCATC GGCTCGGCCT GCAGGCCTTC GGCCTGTCGT TCCATGTTGG CTCGCAGCAG
CGCAATCCGC TGATGTGGGA CTCCGCTCTG CGTTCCTCCT CGGAAATCTT CAAGGATCTC
GCCGAGCGCG GCATTACCTT GCAGATGGTC AATCTCGGCG GTGGTTTTCC GACCAAATAT
TTGCGCGACG TGCCAGCGGT GAAAGCCTAT GGCGAGGCGA TCTTCCATTC GCTGCGCAAA
CATTTTGGCA ACAAGATCCC CGAGACGATC ATCGAGCCGG GCCGTGGCAT GGTCGGCAAT
GCGGGCGTCA TTGAAGCGGA AGTTGTCCTC ATCTCGAAAA AGTCCGAGGA CGATTCTGTC
AAATGGGTCT ATCTCGACAT CGGCAAGTTC AACGGCCTCG CCGAGACGAT GGACGAAATG
ATCCGTTATC CGATCCGCAC AGCCTTTGAC GGCGACGCGT GCGAGCCTTG CGTATTGGCA
GGTCCGACCT GCGATTCCGT TGATGTGCTC TATGAAAAAG ACCCTTATCT GCTGCCGATC
AGCCTCGAAA TCGGGTCGAA AGTACTGATC GAGGGAACCG GCGCCTATAC GACCATGTAT
TCATCGGTCG GCTTCAACGG TTTTCCGCCG CTCAAATCCT ATGTGATCTG A
 
Protein sequence
MTDRIQQFLR SRTEDGPCLV LDLEVVRDNY QAFSKALPDT RVFYAVKANP DPQVLELLAR 
LGSCFDTASV VEIQQVLAAG ASADRISFGN TIKKERDIAR AYALGVRLFA VDCEAEVEKI
ARAAPGSRVF CRILCDGEGA EWPLSRKFGC APSLAPRVLE HAHRLGLQAF GLSFHVGSQQ
RNPLMWDSAL RSSSEIFKDL AERGITLQMV NLGGGFPTKY LRDVPAVKAY GEAIFHSLRK
HFGNKIPETI IEPGRGMVGN AGVIEAEVVL ISKKSEDDSV KWVYLDIGKF NGLAETMDEM
IRYPIRTAFD GDACEPCVLA GPTCDSVDVL YEKDPYLLPI SLEIGSKVLI EGTGAYTTMY
SSVGFNGFPP LKSYVI