| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1078 |
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| Symbol | |
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| ID | 6199223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 1237380 |
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| End bp | 1238810 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641705071 |
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| Product | homospermidine synthase |
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| Protein accession | YP_001832210 |
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| Protein GI | 182678064 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.417526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAT GGCCCGTGCA TGCCAAAATT ACTGGTCCCA TCGTCATGAT CGGCTTCGGC
TCGATCGGAC AAGGCATGCT GCCGCTGATC GAACGTCATT TCGACTATGA TCACGCGCGT
TTCACCGTCA TTGACCCCCG TAAGAAACAC AAGGAATTGC TGGACGAGCG CGGCGTGCGC
TTTATTCAGA AAGCCGTCAC ACGCGAGAAT TTCGTTGATC TTTTGAAGCC CCTCCTGACA
GAGGGCGGAG GTCAGGCTTT TGTCGTCAAT CTTTCCGTCG ATGTGTCTTC ATCGGCCATC
ATGCGCCTCT GTCACGAAGT CGGTGCGCTC TATGTCGATA CTGTCGACGA GCCTTGGCTC
GGCTTCTATA ACGACCCGCG CCTGACCTTG TCACAGCGCT CCAATTATGC CTTGCGTGAA
GACGTGCTCG AACAGAAGCG GGCGCTCGGC AAAGGACCAA CCGCTGTTTC CTGCTGCGGC
GCCAATCCCG GCATGGTCTC CTGGTTCGTC AAACAGGCTT TATTGAATGT CGCCGCTGAC
GTCGGCCTCG ACGCCACGCC GCCGACAAGC CGCGAAGGCT GGGCGAAACT TGCGCAGACG
GTCGGCGTCA AGGGTATCCA TATCGCGGAA CGTGACACAC AACGTGCCAA GACGCCAAAG
CCGATGAATG TCTTCGTGAA TACATGGTCG GTCGAAGGCT TCATCTCGGA AGGGCTGCAA
CCCGCCGAAC TCGGCTGGGG CACGCATGAA CGCCATCTGC CGCCCGAAGG CAAACGTCAT
GATTTCGGCC CCGATTGCGC GATCTATCTG ATGCGGCCCG GCGCTGGCAC ACGCGTGCGA
TCTTGGACCC CAACCGCCAA GGCGCAGCAC GGCTTTCTCG TGACTCATAA TGAATCGATT
TCGATCGCCG ATTATTTCAC GGTGCGCGAA GGCGACAAAG TGGTCTACCG GCCGACCTGT
CATTATGCCT ATCGGCCGGC CGATGACGCG GTCCTGTCAC TCGATGAAAT GGCCGGCGCG
CAATGGCAGC CACAGCCGGA ATTTCACATT CTCGATGAAA ACGAGATCGT CGATGGAATC
GACGAACTCG GCGTGCTGCT CTACGGCCAT GCGAAAAACG CATATTGGTA TGGCTCCCAG
CTCTCGATCG AGGAAACACG GCGTATCGCT CCCTACCAGA ACGCGACCGG CTTGCAGGTC
ACGTCCGCCG TGCTCGCAGG CATGGTCTGG GCGCTCGAAA ATCCGCAAGC GGGCATTGTC
GAGGCCGACG AAGTGGATTT CCAGCGCTGC CTTGAGATCC AGCGTCCCTA TCTCGGCCCG
GTGATCGGCG AATATACGGA TTGGACACCA CTGGTCGATC GCGCGCAATT GTTTGCCGAG
GACCTCGATG AGGAAGATCC CTGGCAGTTC AAGAATGTCA TCGTGCGCTG A
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| Protein sequence | MSQWPVHAKI TGPIVMIGFG SIGQGMLPLI ERHFDYDHAR FTVIDPRKKH KELLDERGVR
FIQKAVTREN FVDLLKPLLT EGGGQAFVVN LSVDVSSSAI MRLCHEVGAL YVDTVDEPWL
GFYNDPRLTL SQRSNYALRE DVLEQKRALG KGPTAVSCCG ANPGMVSWFV KQALLNVAAD
VGLDATPPTS REGWAKLAQT VGVKGIHIAE RDTQRAKTPK PMNVFVNTWS VEGFISEGLQ
PAELGWGTHE RHLPPEGKRH DFGPDCAIYL MRPGAGTRVR SWTPTAKAQH GFLVTHNESI
SIADYFTVRE GDKVVYRPTC HYAYRPADDA VLSLDEMAGA QWQPQPEFHI LDENEIVDGI
DELGVLLYGH AKNAYWYGSQ LSIEETRRIA PYQNATGLQV TSAVLAGMVW ALENPQAGIV
EADEVDFQRC LEIQRPYLGP VIGEYTDWTP LVDRAQLFAE DLDEEDPWQF KNVIVR
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