| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1071 |
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| Symbol | |
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| ID | 6199686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 1228328 |
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| End bp | 1230052 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641705064 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_001832203 |
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| Protein GI | 182678057 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.088062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCCCT TCACCACGCT TCTCGACCGG CTGAGTTTCG AACATTCCCG CACCAATAAA
TTGCGGCTGT TGCGGGATTT CTTCGCCAAT ACGCCCGATC CTGAACGCGG CTATGCCTTG
GCGGCATTGA CCGGCTCCCT CAGTTTTCAA CAGGCCAAAC CCGGCCTGTT GCGCACCTTG
ATCGCGACCA GGGTCGATTC CGTTCTCTTC GATCTCTCCT ATGATTTCGT CGGTGACCTG
TCGGAAACCA TTGCTTTGCT CTGGCCAACG CCGACACAAA CAATCATCGA AGGCTCGAAC
CAGCCGCCGC TGCTTCTCTC GGAAGTGGTG GAAGGGCTGC GCGGCGGCAA GCTTGATCTG
CCGACTAGGA TCGCCTCCTG GCTCGACGCG CTGGACGAGA CAGGCCGCTG GGCGCTGCTC
AAGCTCATCA CGGGTGCCTT GCGCATCGGC GTTTCAGCGC GGCTTGCGAA AACAGCGCTC
GCCGAATGGG GTGGCCAGGA CGTCAACGAA ATCGAGGCGG TCTGGCACGG ACTTGAACCG
CCCTATCTCG ATCTCTTCGC CTGGCTCGAA GGGCGCGAGG CGCGGCCAAA CAGCAAGGAC
CCCGCGCCCT TTCATCCGGC CATGCTCGCC CATGCGATCA CGGAACAGGA TTTTGCGACA
TTACATCCGC ACAATTTCCG TGCCGAATGG AAATGGGATG GCATCCGCGT GCAGGCCGTC
ATCGGCCATC GCGAGAACGG GGTGCGGATC ACACGGCTCT ATACACGCAC CGGCGAGGAA
ATTTCCAAGA CGTTTCCCGA TCTGGTCGAG GCACTCGATG CGCTCCCCTT CGACCGTTTC
GCCATCGACG GCGAATTGCT GATCCTGCGC GATCACCACG TGCAGCCCTT TTCGGTCCTG
CAACAAAGGC TCAACCGCAA AACGGTCTCG GCCAAATTGC TCGCCGATTT TCCTGCCCAT
ATCCGCGCCT ATGATCTCCT GGGACTCAAT GGCGAGGACC TCCGGCCCCT GCCCTTTCTC
GAACGCCGCG CGCGATTAAC ATCCTTCGTG GAAACAGCCG CGTCGCACCG TCTCGATCTC
TCACCTATGA TCCCCTTCGA CACCTTTGAG GATCTCGCAG CGGCTCGTTC CGAGCCGGAA
GCCCATGGAG CGGGAGATGA TGCAGAGGCG GTTGAAGGCG TGATGCTGAA GGAAGCACAT
TCAATCTATA TCCCCGGCCG CCCGAAGGGT CTGTGGTACA AATGGAAGCG CGATCCATTT
ACAGTCGATG CCGTTCTCAT GTATGCGCAG CGCGGACACG GCAAACGCTC TTCGCTCTAT
TCCGATTACA CATTCGGCGT CTGGCGTGGT GATCCAGATT CTCGACATGA CACGGCGCAA
CTCGTGCCAG TCGGCAAAGC CTATTCCGGC TTTACCGATG AAGAGCTCCA TCAGCTCGAT
CATTATGTCC GCGCGCATAC AATCAATCGG TTTGGCCCGG TCCGCGTCGT GGAGCACGGC
AAGGACGATG ACGGCACAAT CTCAGGCCTT GTCCTCGAAA TTGCCTTCGA GGGCCTGAAC
CGTTCGAGCC GCCATAAATC GGGCCTTGCC ATGCGCTTTC CCCGTATCAA TCGCATCCGC
TGGGACAAGC CGGCGCACGA AGCCGATCGG ATCGAAAGTC TGGAAATTCT GTTGCCGCAA
AAACAGAATG CGGAAAAGCG TGTCTTCTCT CCGTTGATCC CTTAA
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| Protein sequence | MKPFTTLLDR LSFEHSRTNK LRLLRDFFAN TPDPERGYAL AALTGSLSFQ QAKPGLLRTL
IATRVDSVLF DLSYDFVGDL SETIALLWPT PTQTIIEGSN QPPLLLSEVV EGLRGGKLDL
PTRIASWLDA LDETGRWALL KLITGALRIG VSARLAKTAL AEWGGQDVNE IEAVWHGLEP
PYLDLFAWLE GREARPNSKD PAPFHPAMLA HAITEQDFAT LHPHNFRAEW KWDGIRVQAV
IGHRENGVRI TRLYTRTGEE ISKTFPDLVE ALDALPFDRF AIDGELLILR DHHVQPFSVL
QQRLNRKTVS AKLLADFPAH IRAYDLLGLN GEDLRPLPFL ERRARLTSFV ETAASHRLDL
SPMIPFDTFE DLAAARSEPE AHGAGDDAEA VEGVMLKEAH SIYIPGRPKG LWYKWKRDPF
TVDAVLMYAQ RGHGKRSSLY SDYTFGVWRG DPDSRHDTAQ LVPVGKAYSG FTDEELHQLD
HYVRAHTINR FGPVRVVEHG KDDDGTISGL VLEIAFEGLN RSSRHKSGLA MRFPRINRIR
WDKPAHEADR IESLEILLPQ KQNAEKRVFS PLIP
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