| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1055 |
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| Symbol | |
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| ID | 6198171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 1211013 |
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| End bp | 1212545 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641705048 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001832187 |
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| Protein GI | 182678041 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGCT TTAATGATTC GCCGGTGCCT GAATCCGCCG AAAAGGCAGA CGGGCTTCTA
TCGCAAGAGC GCGGTACGCA AGATCCATTG GTGAACACGC GAAAACTTTT CGTCAAATCC
TATGGCTGTC AGATGAACGT CTATGACGCG GAGCGCATGG CCGATCTTCT GGCACCTGAA
GGCTATGCCG AAACCAGCGC GCCGGAGGAT GCTGATCTCG TCATCCTCAA TACTTGCCAT
ATTCGCGAGC ATGCAGCGGA AAAAGTCTTT TCTGAACTCG GCAAATTGCG CCTTCTCAAG
GCCGAGCAAC AAGCCGCCGG GCGGCCGGTC AAGATCGTTG TCGCGGGTTG TGTTGCTCAG
GCAGAGGGTG AGGAAATCCT GCGCCGGCAA AAGGCGGTGG ATCTCGTCGT CGGGCCACAG
AGCTATCACC GCTTGCCCGA TCTTCTGCGC CGCGTGGCGC ATACACCGGG CCTGGTCGAC
ACCGAATTTC CCGCCGAGGA CAAATTCGAT CATCTTGTGG CCCCCCAGCC TGAAAAGATC
GCCGAGCGCG GAGTCGGCGC TTTCGTAACC GTGCAGGAAG GGTGCGATAA ATTCTGCAGC
TTCTGCGTCG TGCCCTATAC GAGGGGCGCC GAGACATCGC GTCCGGTGGA AGCGATTTTG
GCCGAGGTTG AGACCCTGAT CGCTTCTGGC GTTCGCGAGG TGACGCTGAT CGGGCAAAAC
GTCAATGCCT ATCACGGATT TGATGCTATG ACCGGCGCGC CGGCTTCGCT CGCGAGCCTC
ATGGCCCGCG TCGCCGCCAT GCCAGGACTC TTGCGCATTC GGTATACGAC CAGCCATCCC
AATGACATGG GCGAGGATCT GATCGCCGCG CATCGCGATA TTCCGGCGCT CATGCCTTTC
CTGCATCTGC CGGTGCAATC CGGGTCGGAC AAGATCCTCG CGGCGATGAA TCGCCGCCAT
AAAGCCGGTG ATTATCTCGA ACTCATCGCC TCGATCCGCG CAGCGCGTCC CGACATTGCA
CTTTCTTCGG ATTTTATCGT CGGCTTTCCC GGCGAGACGG AGGCTGATTT CGAGGCGACG
CTCGCGCTGA TTGAACAGGT CGGTTTCGCC AGCGCTTTTT CGTTCAAATA TTCACAACGC
CCAGGAACGC CCGGCGCCGA TCGGCCAGAT CAAATCGACG AGGATGTAAA AGCTCAAAGG
CTCGCCAGGC TTCAGGCCTT GCTCGAAGAG CAAAGACAGG CATTCAACAA GGCTATGATC
GGACGTGTCC TGCCAGTGCT GTTTGAAAAG CCCGGCCGGC ATCCGGGGCA GATCGCGGGC
AAGACGCCTT ATCTTCAAGC TCTGTATGCG GAAGGTGACA AAGCTTTGAT CGGAACGGTG
CAACCAGTTG AAATTCTGGA AGCTGGCCCC AATTCCTTCC ATGGCCGCCT TCTTGCGCGG
GAGACAGGCC AGGAATCGGC ACAAGGGCAG GAATCGGCAC AAGGGATGGA GCGAATGGAG
CAAAATGCTC GGGCTTGGGA GGTGCCGGTT TGA
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| Protein sequence | MSGFNDSPVP ESAEKADGLL SQERGTQDPL VNTRKLFVKS YGCQMNVYDA ERMADLLAPE
GYAETSAPED ADLVILNTCH IREHAAEKVF SELGKLRLLK AEQQAAGRPV KIVVAGCVAQ
AEGEEILRRQ KAVDLVVGPQ SYHRLPDLLR RVAHTPGLVD TEFPAEDKFD HLVAPQPEKI
AERGVGAFVT VQEGCDKFCS FCVVPYTRGA ETSRPVEAIL AEVETLIASG VREVTLIGQN
VNAYHGFDAM TGAPASLASL MARVAAMPGL LRIRYTTSHP NDMGEDLIAA HRDIPALMPF
LHLPVQSGSD KILAAMNRRH KAGDYLELIA SIRAARPDIA LSSDFIVGFP GETEADFEAT
LALIEQVGFA SAFSFKYSQR PGTPGADRPD QIDEDVKAQR LARLQALLEE QRQAFNKAMI
GRVLPVLFEK PGRHPGQIAG KTPYLQALYA EGDKALIGTV QPVEILEAGP NSFHGRLLAR
ETGQESAQGQ ESAQGMERME QNARAWEVPV
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