Gene Bind_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1006 
SymbolileS 
ID6198502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1152925 
End bp1155930 
Gene Length3006 bp 
Protein Length1001 aa 
Translation table11 
GC content60% 
IMG OID641704997 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001832138 
Protein GI182677992 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATG ATACGCCGAA ACCCGCAGCG AAAGAGTCTA GCGGTCCCGA TTATTCCAAA 
ACGCTTTTCC TGCCGCAGAC GGAATTTCCG ATGCGCGCGG GTCTCCCCAA GAAAGAGCCC
GAGCTGCTCG CCCGCTGGGA ATCGATCGGC CTGCAAAAGC TTCTGCGCGA GGCAGGCAGG
GACCGTCCGA AATTCGTGCT GCATGACGGG CCGCCCTATG CCAATGGCAA TATCCATATC
GGCCATTCGC TGAACAAGAT CCTGAAGGAT CTCGTGACCC GCTCGCAGCA GATGAGCGGG
CACGATTCCA ATTATGTGCC CGGCTGGGAT TGCCACGGTC TGCCAATCGA ATGGAAGATC
GAGGAGCAAT ATCGCGCCAA GGGCAAGAAT AAGGATGATG TGCCGATCAT CGAATTCCGC
CAGGAATGCC GTGCCTTTGC GCAAAGCTGG GTCGATGTCC AGCGCGAGGA ATTCAAACGG
TTGGGCGTCG GCGGCGATTG GGGCCATCCC TATCTCACCA TGACCTTTCC GGCCGAGGCG
CGGATCGCCG AGGAATTGAT GAAATTCGCC GGCAATGGCC TTCTTTATCG CGGCTCGAAG
CCGGTGATGT GGAGCGTGGT TGAAAAAACC GCTCTCGCCG AGGCTGAGGT CGAATATGAA
GACCATACCA GCGATACGAT CTTTGTCGCT TTTCCCATTG CTTCCCTGCG TTGCGAGGGC
GCCACGGGCA ATGCGCTGGA AACGGAATTG CTGAAAGCCT CGATCGTCAT CTGGACGACG
ACGCCTTGGA CCATTCCGGC CAATCGCGCC ATCTCTTATT CACACAAGAT CGCTTATGCG
CTTTATCGCG TGACCGGTGC GCCCGAGGGC AATTGGGTGC AAAAGGGCGC GACTTTCGTG
CTGGCCGAGG CGCTCGCCGA GAATTTCTTC AAATCGGCCA AGGTCGAAGC CTTCGAGCGC
GTCGCCGAGG TGCCGGCCGA GGTGCTGGCC GGGATCACCT GCGCGCATCC GCTCGGCGCC
ACCATTCCCG GCTATGAATT CGCCGTGCCG CTGTTCGATG GCGATCATGT AACGGCCGAA
ACGGGTACTG GCTTCGTCCA TACGGCGCCG AGCCATGGCC GTGAAGACTT TGACATCTGG
ATGGCGAACC AGCGCGTTTT GCGCGAGCGC GGCATCGACA CGCATATTCC CTATACGGTC
GATCCGGATG GCTTCCTCAC CAAGGAAGCG CCTGGGGTCA CGGGAACGCG TGTCATCGAC
GACAAGGGCA ATAAGGGCGA TGCCAATGAC GCCGTGATGA AGGCGCTCAT CGAGGCGCAT
GCCCTGATGG CGCGCGGGCG GATGAAGCAC CAATATCCGC ATAGCTGGCG CTCGAAAAAG
CCTTTGATCT TCCGCAATAC GCCGCAATGG TTCATCGCGC TCGACAAGCC GGTCGAAGGG
TTCAACGGGA CCTTGCGGGA GATCGCGCTC TCCGAGATCA CCAAAACGCG CTGGTATCCT
GCGGCGGGTG AAAATCGCAT TACCGGCATG ATCGCCAACC GGCCCGATTG GGTCGTCTCG
CGCCAGCGTG CCTGGGGCGT GCCGATCACC ATTTTCGTCG AGAAGGAGAG CCAGAAAATC
CTGATCGATC CGAAAGTGAA TGCGCGGATC GTCGAAGCTT TCGCGGCGGA AGGGGCCGAT
GCCTGGTTCG CGGACGGGGC GGCCGAGCGG TTCCTTGCGC CTGACTATGA TCCGGCTCTG
TTCGAGAAGA TCAATGATGT GCTCGATGTC TGGTTCGATT CAGGCTCGAC GCATGCGTTC
ACGCTCGATG ATGCGAGGGA ATTTCCGGGG CTCGCCGGAA TCAAGAGGCT GCGCGAGGGT
GGGCGCGACG AGATCATGTA TCTCGAAGGC TCCGACCAGC ATCGCGGCTG GTTCCATTCC
TCCCTGCTCG AATCCTGCGG CACGCGCGGC ATGGCGCCCT ATGATGCCGT GCTGACACAT
GGCTTCGTGC TCGATGAGCA GGGGCGCAAA ATGTCGAAAT CGCTCGGCAA TGTCACCGCG
CCGCAATCGG TCATCAAGGA TGCCGGCGCT GATATTTTGC GGCTCTGGGT GGCGGCCTCC
GATTATTCGG ATGATCTGCG CATCGGCAAA CAGATCCTTT CGACCTTCAC CGAAACCTAC
AAGAAATTGC GCAATACGAT CCGCTGGATG CTGGGATCGC TTGCGCATTA TGATGCGAAA
CAGACGCCTG CCTATGAAGA ATGGGACGAA CTCGAACGGC TGATGCTGCA CAGGCTCGCC
GAACTCGATG GCGAAATCCG CGATGCCTAC CGGCGCTTCG ATTACAAACG CGTCGTGGCG
CGCCTGTCCG CCTTTCTCAA CACGGATCTT TCCGCGTTTT ATTTCGATAT CCGTAAGGAT
ACGCTTTACT GCGATCCGCT TTCGAGCCGT AAACGCCACG CGGCTTTGGC GGCGATCGAG
CAGATTTTCC GCTGCGTGAC ACTTTGGCTT GCGCCGATCC TCGTCTTCAC CATGGAAGAA
GCCTGGCTCT CGCGCTATCC TGAGGCTGTT TCGGTTCATC TCGAACAATT TCCCGATGTG
CCCGCGCATT GGCGCGATGA TGCCTTGGCG GCGAAATGGG CGATCATCCG CAAGATCCGT
TCGGTGGTCA CCGGCGCATT GGAAATCGAG CGTGCGCAGA AACGGATTGG TTCTTCGCTC
GAGGCGGCGC CGCGGGTCTT CATCGCCGCG GAGGATATGC GCGCTTTGCT CGCGGGGGTG
GATTTCGCCG AAATTTGTAT CACCTCGGAT ATTACGATCG AGGCGGGGGA AGGACCCGAG
GAGGCTTTCC GCTTGGCCGA CGTGCCGGGC GTGGCAGTTG TCAGCGCTGC GGCAGCGGGC
CGCAAATGCG CGAGGTCCTG GAAGGTGTCT CCACATATTG GCGCCGATCC GGACTATCCC
GATGTGAGCC CGCGCGATGC CCAGGCCTTG CGGGAATTGA AGGCGGCCGG CCTGTGGACG
GCGTGA
 
Protein sequence
MTDDTPKPAA KESSGPDYSK TLFLPQTEFP MRAGLPKKEP ELLARWESIG LQKLLREAGR 
DRPKFVLHDG PPYANGNIHI GHSLNKILKD LVTRSQQMSG HDSNYVPGWD CHGLPIEWKI
EEQYRAKGKN KDDVPIIEFR QECRAFAQSW VDVQREEFKR LGVGGDWGHP YLTMTFPAEA
RIAEELMKFA GNGLLYRGSK PVMWSVVEKT ALAEAEVEYE DHTSDTIFVA FPIASLRCEG
ATGNALETEL LKASIVIWTT TPWTIPANRA ISYSHKIAYA LYRVTGAPEG NWVQKGATFV
LAEALAENFF KSAKVEAFER VAEVPAEVLA GITCAHPLGA TIPGYEFAVP LFDGDHVTAE
TGTGFVHTAP SHGREDFDIW MANQRVLRER GIDTHIPYTV DPDGFLTKEA PGVTGTRVID
DKGNKGDAND AVMKALIEAH ALMARGRMKH QYPHSWRSKK PLIFRNTPQW FIALDKPVEG
FNGTLREIAL SEITKTRWYP AAGENRITGM IANRPDWVVS RQRAWGVPIT IFVEKESQKI
LIDPKVNARI VEAFAAEGAD AWFADGAAER FLAPDYDPAL FEKINDVLDV WFDSGSTHAF
TLDDAREFPG LAGIKRLREG GRDEIMYLEG SDQHRGWFHS SLLESCGTRG MAPYDAVLTH
GFVLDEQGRK MSKSLGNVTA PQSVIKDAGA DILRLWVAAS DYSDDLRIGK QILSTFTETY
KKLRNTIRWM LGSLAHYDAK QTPAYEEWDE LERLMLHRLA ELDGEIRDAY RRFDYKRVVA
RLSAFLNTDL SAFYFDIRKD TLYCDPLSSR KRHAALAAIE QIFRCVTLWL APILVFTMEE
AWLSRYPEAV SVHLEQFPDV PAHWRDDALA AKWAIIRKIR SVVTGALEIE RAQKRIGSSL
EAAPRVFIAA EDMRALLAGV DFAEICITSD ITIEAGEGPE EAFRLADVPG VAVVSAAAAG
RKCARSWKVS PHIGADPDYP DVSPRDAQAL RELKAAGLWT A