| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1002 |
|---|
| Symbol | |
|---|
| ID | 6201078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1148591 |
|---|
| End bp | 1149550 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641704993 |
|---|
| Product | protein-export membrane protein SecF |
|---|
| Protein accession | YP_001832134 |
|---|
| Protein GI | 182677988 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TGCGCCTCGC GCCTGAAAAT ACCCGCTTTC CCTTCATGCG CCTGCGCCGG
CTGAGCTATC CATTCTCGGC CCTGATGTCG ATTCTGGCGG TCACGATCTT TCTCACCTGG
GGCATGAATT TCGGCATCGA TTTTTCGGGC GGCACTTTGC TTGAATTACG CGCCAAGGAA
GGACCCGCCG ATCTCGTCGA ATTGCGCGAA TTGGGGGATC ATCTCAATAT CGGCGATATT
GAAGTCCAGG GTTTTGGGAC GCCTTCCGAT GTGACCGTGC GTTTTGGCCT CCAGCCCGGC
GGCGACGCGG CGCAGGAAGC AGCCGTCAAT CGCGTGCGGC AAACCATCGG CGAGCGCTAT
GACATCCGCA GGATCGAGGT CGTTGGCCCG CGTGTTTCGG GTGAGCTCGT CCAGTCCGGC
ACGCTCGGCG TCGTTTTGTC GATCATCGCC GTGCTCGGCT ATCTCTGGTT CCGTTTCGAA
TGGCAATTTG CCGTCGGCGC CATCATCGCC ACAATGCATG ATCTCTTGCT GACAGTCGGC
TTTTTCTCCG TCACGCAGCT CGAATTCAAC ACGACATCCA TTGCCGCCAT CCTGACCATT
GTCGGCTATT CCTTGAACGA AACGGTTGTC GTGCTCGACC GTATTCGTGA AATGATGAAG
AAATACCGGA AGATCCCGAC CGATCAATTG ATCGATCTTT CGGTGAATGC GGTGCTGCCG
CGCACGATCA TGACGGCGAC GACCGTGTTC CTCGCGCTGC TCTCACTCGT GATTTTCGGT
GGCCAGGTGA TCCGGTCGTT TTCGCTCGCC ATGATCTGGG GCATTGTGGT CGCGACTTAT
TCCTCGGTCT TCATCTGCTC GCCGATGCTG ATCTATCTCG GTCTCCGCAA TGAGGGCGGC
GAGACGGCCA AGGCCGATAC GCAATCGCCT TCGGGGAAAG CGGCGAAGGC TTCTGTATGA
|
|---|
| Protein sequence | MKLLRLAPEN TRFPFMRLRR LSYPFSALMS ILAVTIFLTW GMNFGIDFSG GTLLELRAKE
GPADLVELRE LGDHLNIGDI EVQGFGTPSD VTVRFGLQPG GDAAQEAAVN RVRQTIGERY
DIRRIEVVGP RVSGELVQSG TLGVVLSIIA VLGYLWFRFE WQFAVGAIIA TMHDLLLTVG
FFSVTQLEFN TTSIAAILTI VGYSLNETVV VLDRIREMMK KYRKIPTDQL IDLSVNAVLP
RTIMTATTVF LALLSLVIFG GQVIRSFSLA MIWGIVVATY SSVFICSPML IYLGLRNEGG
ETAKADTQSP SGKAAKASV
|
|---|
| |