Gene Bind_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_0970 
Symbol 
ID6201149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1109457 
End bp1110644 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content60% 
IMG OID641704962 
Productmajor facilitator transporter 
Protein accessionYP_001832103 
Protein GI182677957 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.586357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCA CTCAACCCGC AAGTGCCGCG ACGACATCGG TCGGCAAGGG GCTTCTCTTC 
GCAATGGCTG CTTCTTGCGG CATCGCTGTC GCCAACATCT ATTACAATCA GCCGATGCTC
GGCGTGATCG AAGACTCTTT TGATCATGCA GGCGCAGCCG GGCTCATCCC GACTGCGACG
CAACTCGGCT ATGCGGCTGG CTTGTTCCTG CTCGTGCCAC TTGGGGATCT GGTCGAGCGG
CGTAGGCTCA TTGTCATGCA ATTCGCTTTG CTCGGCATCG TCCTTGCCCT GGCTGGTCTC
GCCCCCTCGG CTTGGACGCT GGTCATCGCG TCTTTGTGTA TCGGCTTTGC CGCAACGGTG
GCGCAGCAGA TCATCCCGTT CGCGGCATCC CTCGCGCCCG CCAGTGAACG CGGCGCCGTG
ATCGGAACGG TGATGGGAGG TCTGCTGTGC GGAATCCTTC TCAGCCGGAC GCTTGCCGGC
TATGTCGCGA CATATTTTGG CTGGCGTGAA ATGTTCTGGA TTGGTGTCCC GCTTGCCTTA
ATCGGCGGTG TGTTGATGCG TGTTGTATTG CCTTTGAGCC AGATCTCCTC GGATATCCGC
TATCCGGCTC TCATCCGATC ATTGGCGGGC CTTTGGCAGG ATGAGCCGAT CCTGCGCCAG
GTGACGATCG TGCAGGCGGC TCTGTTTGCA TCGTTCACCG CATTTTGGAC GATCCTGGCG
TTGCGCCTGC AAGGCGCGGC ATTTCATCTT GGCGCGGATG TAGCGGGTCT CTTTGGTTTC
GTTGGCGCGG TTGGCATCCT TGCCGCTCCG ATGGCTGGGC ATCTTGCCGA TCGGCGTGGG
CCTCGCCCTG TCGTCTTGCT TGGACTTGGT TCAGTCCTGC TGGCTTGGAT CCTTTTCGGC
GTTTGGACGA GCTTGGTGGG CCTCGTGGTG GGTGTCGTTG TCTTGGATTT TGGTATGCAG
AGCGCATTGG TTTCTCACCA ACACATGGTT TTTGCCTTGC GTCCTGAGGC GCGCAGCCGT
CTGAACACAA TCTTCATGAG CGGGATGTTC GTCGGTGGGG CGATTGGATC CGCCGGCGCG
ACCTTCGCCT GGAATATCGC CGATTGGCCG GGTGTATGCG TTTATGGCAC TGGGCTCGCC
TTGTTCGCGC TTGCTGTTCG ATTGCTTGGC GGCCAGCCCG CTCGTTGA
 
Protein sequence
MQITQPASAA TTSVGKGLLF AMAASCGIAV ANIYYNQPML GVIEDSFDHA GAAGLIPTAT 
QLGYAAGLFL LVPLGDLVER RRLIVMQFAL LGIVLALAGL APSAWTLVIA SLCIGFAATV
AQQIIPFAAS LAPASERGAV IGTVMGGLLC GILLSRTLAG YVATYFGWRE MFWIGVPLAL
IGGVLMRVVL PLSQISSDIR YPALIRSLAG LWQDEPILRQ VTIVQAALFA SFTAFWTILA
LRLQGAAFHL GADVAGLFGF VGAVGILAAP MAGHLADRRG PRPVVLLGLG SVLLAWILFG
VWTSLVGLVV GVVVLDFGMQ SALVSHQHMV FALRPEARSR LNTIFMSGMF VGGAIGSAGA
TFAWNIADWP GVCVYGTGLA LFALAVRLLG GQPAR