Gene Bind_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_0912 
Symbol 
ID6200917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1043311 
End bp1044528 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content61% 
IMG OID641704909 
Productmajor facilitator transporter 
Protein accessionYP_001832050 
Protein GI182677904 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.973164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.300944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG GCGGCAAGGC AAAATTCGCT GTGAAAGGGC TGTCACCGGC CCTGACGCTC 
GCTTGTGCCG TAGCCTGCGG CACCATGGTC GCCAATCTCT ATTATGCGCA GCCGCTGGTT
GATCTGATCG CACCCGACCT CGGCCTCGAT GAGAGTTATG CTGGCCTGAT CGTGACTTTG
ACGCAGCTCG GCTATGGCGC GGGCCTGCTC CTGCTCGTGC CTCTGGCCGA TTGCCTCGAC
AATCGGCGTC TGATCCTGAG CACTTTGCTC GCAACCGCTG TCGCACTGGT CGGCGTCGCG
ACGGCCCCCT CCGAATTTCT TTTCCTCGTT GCCACGATTC TGGTGGGAGT CTGCGCATCG
GGAGCCCAGG TCATCGTTCC CTTCACGGCC TCCCTGGTGC CCGAGGAAAT CCGCGGCCAG
ACGATCGGCA ATGTCATGGC GGGCCTGCTC ACCGGCATCA TGCTGGCGCG ACCGGCCGCC
AGCCTCATCG CCAATTATGC AGGCTGGCGC GCGGTTTTTT GGATTTCGAG CGGATTGATG
CTGCTCCTGT TCACCTGGCT CGCCAAAACC CTGCCGAGCT ACCGGCTGCA AGAGCGTGAT
CATTATAGCA AGATCCTGCG TTCCATGGGC CATATTCTGG TCAGTTCGCG CCCACTTCAA
CGCCGCGCGA TCTATCAGGG CATAGCCTTC ATGGTGTTCA ATCTGTTCTG GACCGCCTCA
CCGCTGGTGC TGACACATCG TTTCGACTTC GATCAGAAGG ATATTGCTCT CTTCGCCCTG
GCAGGCGCTG GCGGCGCCCT CGCCGCCCCG GTTGCGGGAC GGCTCGGCGA TCGCGGCTAT
GTGCGTGCCG GAACCGCTGT GGCCTTGAGC ACGATCACGC TGAGTTGCCT GTTCTCCGGG
TTCGCGGTCT CATGGCACTG GCTGACGCCG CTCGTCATTT TCGCGGTGAC GCTTGATGCC
GCCGTGCAGC TCAACCAGAT TCTGAGCCAG CGCGTGATCT TTTCCCTGCC AGGCCATGCA
AGGGGGCGAT TGAACGCCAT CTATATGACA ATCGTCTTCC TGCTCGGCGC CATGGGCTCG
GCCGTCGCAA CCTTCACCTA TCATGAAGGC GGTTGGTGGA TGACGGCGCT AACCGGCACG
GGATTAGGCT TGCTGGTAAC GGGCCTTTTC GCAACCGAAT GGGTCAAACC CACAAAGACA
CACAAGCTGA AGAGATAA
 
Protein sequence
MSAGGKAKFA VKGLSPALTL ACAVACGTMV ANLYYAQPLV DLIAPDLGLD ESYAGLIVTL 
TQLGYGAGLL LLVPLADCLD NRRLILSTLL ATAVALVGVA TAPSEFLFLV ATILVGVCAS
GAQVIVPFTA SLVPEEIRGQ TIGNVMAGLL TGIMLARPAA SLIANYAGWR AVFWISSGLM
LLLFTWLAKT LPSYRLQERD HYSKILRSMG HILVSSRPLQ RRAIYQGIAF MVFNLFWTAS
PLVLTHRFDF DQKDIALFAL AGAGGALAAP VAGRLGDRGY VRAGTAVALS TITLSCLFSG
FAVSWHWLTP LVIFAVTLDA AVQLNQILSQ RVIFSLPGHA RGRLNAIYMT IVFLLGAMGS
AVATFTYHEG GWWMTALTGT GLGLLVTGLF ATEWVKPTKT HKLKR