| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0869 |
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| Symbol | |
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| ID | 6200289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 989594 |
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| End bp | 992917 |
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| Gene Length | 3324 bp |
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| Protein Length | 1107 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641704867 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001832008 |
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| Protein GI | 182677862 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.292684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.18024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGA GGACGGATAT CGGCACCATC ATGATCATCG GCGCAGGGCC GATCATCATC
GGTCAGGCAT GTGAATTCGA TTATTCCGGC ACGCAGGCCT GCAAGGCTCT GCGCCAGGAA
GGGTACCGCA TCGTCCTCGT CAATTCCAAT CCGGCAACGA TCATGACCGA TCCGGACATG
GCCGATCGCA CCTATATCGA GCCGATCACG CCGGATGTGG TGGCCAAAAT CATTGCCAAG
GAGCGCCATG CCGCGCCAGG CGGTTTCGCC CTTTTGCCGA CGATGGGCGG CCAGACCGCG
CTGAATTGTG CCCTCTCCCT CAAGAAAATG GGGGTGCTGG AGGATTATGA TGTCGAAATG
ATTGGCGCCA CCGCCGAGGC GATCGACAAG GCCGAGGATC GTGAATTGTT CCGCGAGGCC
ATGACCAAGA TCGGCCTTTC GACGCCACGC TCGCATCAGA TCAAGACGCT GACCCAGGCG
CTCGACATTC TGGACGATAT CGGCCTGCCG GCGATCATCC GCCCTTCCTT CACCATGGGC
GGCACCGGCG GCGGCATTGC CTATAACAAG GCGGAATTCA TCGACATTAT CGAGCGGGGC
ATCGATGCCT CGCCGACCAA TGAGGTTCTG GTCGAGGAAA GCGTCCTCGG CTGGAAGGAA
TATGAAATGG AGGTCGTGCG CGACCGCAAC GACAATTGCA TCATCGTCTG CTCGATCGAA
AATATCGATC CTATGGGCGT CCACACCGGC GATTCGATCA CCGTCGCCCC TGCCCTGACG
CTGACTGACA AAGAATATCA GGTCATGCGC GACGCCTCGC TCGCCGTCTT GCGCGAGATC
GGCGTCGAGA CGGGTGGCTC CAATGTCCAA TTCGCGGTCA ATCCGAGCGA CGGCCGGATG
ATCGTCATCG AAATGAATCC GCGCGTCTCG CGCTCTTCGG CTTTGGCGTC GAAGGCGACT
GGATTTCCGA TCGCCAAGGT CGCCGCGAGA CTTGCCGTCG GCTATACGCT CGATGAAATC
GCCAATGATA TTACCGGCGG CGCGACGCCG GCCTCCTTCG AGCCGACGAT CGATTATGTC
GTCACCAAAA TTCCGCGCTT CGCCTTCGAG AAATTTCCTG GCGCCGAGGA TACACTGACG
ACGGCGATGA AATCCGTCGG CGAGAGCATG GCGATTGGCC GCACCTTCGC CGAAAGCCTG
CAAAAAGCTT TGCGCTCGCT CGACACCGGC CTCACCGGCC TCGACGAGAT CGCCATAGAC
GGCCTCGGTC TTGGCGATGA CATGAATATA CTGCGTGGCG CGCTCGGACG GCCGACGCCC
GACCGTCTGC TGATCGTCGC GCAGGCCATG CGCGAGGGCA TGAGCGTCGA AGAAATCCAC
GAGGCTTGCG CCATCGACCG CTGGTTCCTC GAACAGATCG AGGGCATTTT GAAGCTGGAG
GCCAAGGTGC GCGCCTTCGG CCTGCCTGAG GATGCCGCCA ATTTGCGGCT GTTGAAGGCC
GCCGGCTTTT CCGACACGCG CCTTTCAACC TTGGCCAAGG TGACGCCGCA GGAAGTCGCG
GCGCTCCGCG CGAAACTCGA TGTGCATCCT GTCTTCAAGC GCATCGATAC CTGCGCCGCT
GAATTTGCCT CGCCAACCGC CTATCTCTAT TCGACCTATG CACCACCTTT CGCGGGTGCG
CCCGTCTGCG AAGCAAAGCC CAGCCCACGC GACAAAGTGG TCATTCTTGG CGGCGGGCCG
AACCGGATCG GCCAAGGCAT CGAATTCGAT TATTGCTGCT GTCAGGCTTG TTTCGCCCTG
CATGATGCGG GTTTCGAGAC GATCATGATC AACTGCAATC CGGAAACGGT TTCAACCGAC
TATGACACCT CCGACCGGCT CTATTTCGAG CCCCTGACGC CCGAGGATGT GCTTGCCATT
CTCGCCAAGG AGCAGGAAGC CGGCACCCTG AAGGGCGTGA TTGTCCAATT TGGCGGCCAA
ACGCCCCTGA AACTTGCTCA TACTCTTGAA AAAGCGGGTA TTCCCATCCT TGGCACCTCG
GTCGACTCGA TCGACCTTGC CGAAGACCGC GACCGCTTCA AATGGCTTCT CGATAAAGTC
GGCCTCAAAC AGCCGATGAA CGGCATCGCT TATTCGGTCG AGCAGTCCCG CCTCGTCGCC
TCTGATCTCG GCCTGCCGCT CGTCGTGCGC CCCTCCTATG TGCTGGGCGG CCGAGCCATG
GCGATCATCC GCGACAATGC ATCTTTCGAT GATTATCTGC TCGGCACTTT GCCGGGGCTC
GTGCCCTCCG ATATCAAGGC CCGCTATCCC AACGACAAGA CCGGTCAGAT CAATACGGTG
CTCGGCAAGA ATCCGCTGCT GTTCGACCGC TACCTTTCCG ACGCCGTTGA AGTCGATGTC
GACGCCCTCT GCGACGGCAA GGATGTCTTC ATCTGCGGCA TTATGGAACA TATCGAGGAA
GCCGGCATTC ATTCCGGCGA TAGCGCCTGC TCGCTGCCGC CGCGCTCGCT CGGGCCGGAC
AAGATCGCCG CGCTCGAGGA ACAGACGCGC AAGTTGGCCC TGGCACTCAA GGTCGGCGGC
TTCATGAATG TCCAATATGC CTTGAAGGAT GGCGAGATCT ACGTGCTGGA GGTCAATCCG
CGCGCCGCGC GAACAGTGCC CTTCGTCGCC AAGGTCATCG GCATTCCACT CGCCAAAATC
GCCTCGCGGA TCATGGCCGG TGAAAACCTG GCGAGCTTCC GTCTCGAACC GAAGAAACTG
CGTCATGTCG GCGTCAAGGA AGCCGTCTTT CCCTTCGCTC GTTTCCCCGG CGTCGATACA
GTCCTCGGCC CCGAAATGCG CTCGACCGGC GAGGTCATGG GCATTGATTT CTCCTTTGCC
ATCGCCTTCG CCAAAAGCCA GCTCGGCGGC GGCACCAAGG TGCCGACCAA GGGCACGGTC
TTTGTTTCTG TGCGCGATGA GGACAAGCCG CGTGCCGTCG ACACGATCAA GCTGCTGATC
AATCTGGGCT TCAAGATCTG CGCGACGGGC GGCACATCCC GTTTCCTCGA GGGGGAAGGC
ATAGAAGCGC AGCGCCTGAA CAAAGTTTCG GAAGGGCGCC CGCATGTCGT CGACGCGATC
AAGAACGGCG CGATCCAGCT CGTTCTGAAC ACGACCGAGG GGGCGCAGGC ACTCGCCGAT
TCACGCTCCT TGCGGAGGGC GGCGCTGCTG CATAAAGTTC CCTATTATAC AACGCTTGCC
GGTGCCATAG CGGCGGCCCA GGGAATCAGG GCCTATCTCG CCGGGGACCT GGAAGTTCAT
GCCCTGCAGG ATTATTTCGC CTGA
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| Protein sequence | MPKRTDIGTI MIIGAGPIII GQACEFDYSG TQACKALRQE GYRIVLVNSN PATIMTDPDM
ADRTYIEPIT PDVVAKIIAK ERHAAPGGFA LLPTMGGQTA LNCALSLKKM GVLEDYDVEM
IGATAEAIDK AEDRELFREA MTKIGLSTPR SHQIKTLTQA LDILDDIGLP AIIRPSFTMG
GTGGGIAYNK AEFIDIIERG IDASPTNEVL VEESVLGWKE YEMEVVRDRN DNCIIVCSIE
NIDPMGVHTG DSITVAPALT LTDKEYQVMR DASLAVLREI GVETGGSNVQ FAVNPSDGRM
IVIEMNPRVS RSSALASKAT GFPIAKVAAR LAVGYTLDEI ANDITGGATP ASFEPTIDYV
VTKIPRFAFE KFPGAEDTLT TAMKSVGESM AIGRTFAESL QKALRSLDTG LTGLDEIAID
GLGLGDDMNI LRGALGRPTP DRLLIVAQAM REGMSVEEIH EACAIDRWFL EQIEGILKLE
AKVRAFGLPE DAANLRLLKA AGFSDTRLST LAKVTPQEVA ALRAKLDVHP VFKRIDTCAA
EFASPTAYLY STYAPPFAGA PVCEAKPSPR DKVVILGGGP NRIGQGIEFD YCCCQACFAL
HDAGFETIMI NCNPETVSTD YDTSDRLYFE PLTPEDVLAI LAKEQEAGTL KGVIVQFGGQ
TPLKLAHTLE KAGIPILGTS VDSIDLAEDR DRFKWLLDKV GLKQPMNGIA YSVEQSRLVA
SDLGLPLVVR PSYVLGGRAM AIIRDNASFD DYLLGTLPGL VPSDIKARYP NDKTGQINTV
LGKNPLLFDR YLSDAVEVDV DALCDGKDVF ICGIMEHIEE AGIHSGDSAC SLPPRSLGPD
KIAALEEQTR KLALALKVGG FMNVQYALKD GEIYVLEVNP RAARTVPFVA KVIGIPLAKI
ASRIMAGENL ASFRLEPKKL RHVGVKEAVF PFARFPGVDT VLGPEMRSTG EVMGIDFSFA
IAFAKSQLGG GTKVPTKGTV FVSVRDEDKP RAVDTIKLLI NLGFKICATG GTSRFLEGEG
IEAQRLNKVS EGRPHVVDAI KNGAIQLVLN TTEGAQALAD SRSLRRAALL HKVPYYTTLA
GAIAAAQGIR AYLAGDLEVH ALQDYFA
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