| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0857 |
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| Symbol | |
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| ID | 6198841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 976521 |
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| End bp | 978239 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641704855 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001831996 |
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| Protein GI | 182677850 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.6877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGTCG CCTGTGCTCT GTTGGTTCCA GCCCCCTTGG CGCTGGCACG GGCCCGTGAA
AGCCTGGCCA TAGCGACACC TTTCGAGGTC GGTGACAGCC CGATCGGCAA TTATCTCGCT
GCCTATGTCG CAGGCATCGA TAAGGACACG CTCGCGGCAG CCACCTATTT TCGCGAAGCC
TTGCGTTATG ATCCGCATAA TTCGGCTTTG ATCGAGCGGG CTTTTGTCGC CGCGATTTCG
AACGGCAACA TGCAGGATGC GTTTGGTTTC GCGGATCGTC TGCTCGCGCG TGATCCCGGT
AACGGCCTTG CCCATCTCGC CTTGGGCGTC AAGGCGATCA AGCAGCATCA ATATGCGGCC
GCGCGCAATC ATTTCGCGCG GGGCGGCGCT GGGCACGAAC GCGATATTAC CGCGACGCTT
CTTGCGGCCT GGACCTATGC AGGCAGTGGA GAATACAAGC GCGGGCTTGA ACTGGTCGAT
CGCCTGCATG ATGAAAGCTT CGGCGTGTTT CGCGATTTCC ACGGCGGCTT GATCGCCGAT
GTCGCGCATA ATCCAACCGA AGCGGCGCGT CGGCTGAAGG CCTCCTATGA TACCGACAAG
AACACTTTGC GGCTTGTCGA TGTCTATGCG CGATTCCTGG CGCTGCATGG CCGCCGTGAC
GAAGCGATCA AGGTCTATGA GGCCTTCGAC GAGATTCTGC CCAATCATCC GATCATCAGC
GCCGCGCTTG CCACGTTGAA GAGCGGCAAG ACGCTCGAGT CGCCGGTGCG CACACCGGAG
GAGGGCGCTG CCGAAGTGCT CTATGGCCTG GGTGCCGCCG GCAGCCGGCA AGGCGACGAA
CTGGCCGCGA TGATCTATCT TCGTCTATCG CTGTTTCTCG CGCCCGAGAA CAGCCTCGCC
ATCATTACGC TTGGCGATAT TTATGAACGC ATCAAGCAGA ACGAGCGGGC GATCGACGTC
TATGAAACCG TGCCCGACGA TGATCCCTTG CGGATTACTG CCGATATCCA GTCCGGACAG
ATTCTCGAAG CCCTCGGCCG CACCGAGGAG GCGAACAAAT ATCTGAAACG AATCGTCGAG
GAACATCCGA AGGATAGCGA TGCTTTATCG GCGCTCGGCA ATCTGCAGCG CGCCCATAAG
CAATATGCCG AGGCCATCGA AACCTATACT CAGGCGCTCG CCGCCACGAG CAAGCCGGAA
AAGGCCAATT GGCCGCTCTA TTATTTCCGT GGCATTTCCT ATGAGCGTAA CAAGCAATGG
CCGCAGGCGG AGGCCGATTT CCGCCGCGCC CTGGCTTTGT TCCCGGACCA GCCTCTGGTG
CTGAATTATC TTGGTTATAG CTGGGTCGAT CAGGGACTCA ATCTCGACGA GGCCTTTGCC
ATGCTGCACA AGGCCGTGGA ATTGCGGCCG ACCGACGGTT ATATCGTCGA CAGTCTTGGC
TGGGCCAATT ACCGGCTGGG CCGCTATGAC GAGGCGGTCA AGGAACTCGA GCGGGCCATT
GATCTGAAGC CTTCCGATCC GGTCATCAAT GATCATTTGG GTGATGCCTA TTGGCGGGTC
GGGCGCAAGC TCGAAGCTCA TTTCCAATGG AACCATGCGC GTGATCTTGG GCCCGAGCCC
GAGGACAAGG ACAAGATCCT GGCCAAGATT GAGCACGGGC TTGATGACGA AGAAAAGCCC
GCCGCCGCCG AGGCTCGCCC CGCCAAAAAC GGGGGATGA
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| Protein sequence | MAVACALLVP APLALARARE SLAIATPFEV GDSPIGNYLA AYVAGIDKDT LAAATYFREA
LRYDPHNSAL IERAFVAAIS NGNMQDAFGF ADRLLARDPG NGLAHLALGV KAIKQHQYAA
ARNHFARGGA GHERDITATL LAAWTYAGSG EYKRGLELVD RLHDESFGVF RDFHGGLIAD
VAHNPTEAAR RLKASYDTDK NTLRLVDVYA RFLALHGRRD EAIKVYEAFD EILPNHPIIS
AALATLKSGK TLESPVRTPE EGAAEVLYGL GAAGSRQGDE LAAMIYLRLS LFLAPENSLA
IITLGDIYER IKQNERAIDV YETVPDDDPL RITADIQSGQ ILEALGRTEE ANKYLKRIVE
EHPKDSDALS ALGNLQRAHK QYAEAIETYT QALAATSKPE KANWPLYYFR GISYERNKQW
PQAEADFRRA LALFPDQPLV LNYLGYSWVD QGLNLDEAFA MLHKAVELRP TDGYIVDSLG
WANYRLGRYD EAVKELERAI DLKPSDPVIN DHLGDAYWRV GRKLEAHFQW NHARDLGPEP
EDKDKILAKI EHGLDDEEKP AAAEARPAKN GG
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