Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0777 |
Symbol | |
ID | 6200688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 870379 |
End bp | 871182 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641704774 |
Product | OmpW family protein |
Protein accession | YP_001831916 |
Protein GI | 182677770 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.362007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.262846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTC TCTGCGAAGA TCCAATCAGC CAGGCCAGTA TTAAGGAGTT GCCCTTGCGT AAATTCATTC GGTTTGTTCT CGCTGCTTTT CTCTTGAGTT CGGCAGCGGT CGAAGCAACG GCGGCTGATC TTCCTCCTGT TCCGGCAACG CCCGCGCCGA CTCTTCCGGA TGCCTTCCAG CCCTGGCAGA TTCGTCTGCG CGCCGTCGGC CTCATCACGT CATCGGGCGG CGGCAATACT GTTCGCGCGC AAGCAAACGG TGCTTATGTC AGTGATGGCA TCAAGGCGAG CAATGCTGTT ATTCCGGAAA TCGATATCAG CTATTACCTG ACCAAGAATT TCGCTCTCGA ACTCGTTTGC TGCGTCTCCT ATCACAAGCT CTTCCTGAAG GGCGGCCCGT TGGCGAATAC GCAGGTAGGC GATACCTGGG TCTTCCCGCC CACGGTCATG CTGCAATATC ACTGGACCGA TTTTGGCAAG TTTCAGCCCT ATATCGGCGT CGGTGTGAAC TATACGCATT ACTTCAACCA GCAGGCGGCC TATGGCGTTC TCAGCCATCT GAGTGTCAAT GATTCCTGGG GCATCGCCGG TCAGGTCGGT TTTGATTACA TGATCAATGA TCATTGGGGC GTCAACGTCG ACGTCAAGAA GATCATGATG GAGCCGAGCG TCACGGCCAA CCTCGGCAAC GGCACCCTGC TGCGCGGCGG CGCGAGGATT GATCCCTGGC TCATCGGCGC CGGCATCACT TATCGCTTCG GTGGCCCGGA TGCGGCGCCA GCCCCGGTTC TTGCGAAATA TTGA
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Protein sequence | MTTLCEDPIS QASIKELPLR KFIRFVLAAF LLSSAAVEAT AADLPPVPAT PAPTLPDAFQ PWQIRLRAVG LITSSGGGNT VRAQANGAYV SDGIKASNAV IPEIDISYYL TKNFALELVC CVSYHKLFLK GGPLANTQVG DTWVFPPTVM LQYHWTDFGK FQPYIGVGVN YTHYFNQQAA YGVLSHLSVN DSWGIAGQVG FDYMINDHWG VNVDVKKIMM EPSVTANLGN GTLLRGGARI DPWLIGAGIT YRFGGPDAAP APVLAKY
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