Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0567 |
Symbol | |
ID | 6199155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 629939 |
End bp | 631519 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641704558 |
Product | RNA polymerase, sigma 54 subunit, RpoN |
Protein accession | YP_001831708 |
Protein GI | 182677562 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTTT CAACCAAACT CGTCATGCGT CAGGGACAGT CCCTGGTGAT GACGCCGCAG CTTTTGCAGG CCATCAAGCT GCTCCAATTT TCCAATCTGG AACTGGCTGC CTTCGTCGAG GACGAACTCG AACGCAATCC CCTCCTCGAA CGGGCGGAGG AAGCGCACGA GCCCTACGAG CCCATGCTTT CCACCGCTTA TGAGGCAAAG GATGGCCATG ATTTCGGCGA TCCGGAAGGC CATGCCTTCA ACGAATCGAG CGAGGCCGAC TGGAATTCCG AGTCTTTTGC CACCGATCGC GGCTCCATGG AAGCAAGCCT CGGCACCGAA TTGTCCAACA CCTTCGATGA TGACCGCGCG CCGACCCCCG GCGACCATCA TGACGCCGGC CTCGACGGTT ATGGTCTTGA GGGAGCCGGT CTTTCCGCCA CGTCCTGGTC AGGCACATCC GGCCTCAATG GCGATGGCGA GGCGACCAAT CTTGAAGCCT ATGTCGCCGC CGAAGCGACG CTCAAGGATC ATCTGGCCGG CCAATTGGCC ATCGCGACCT CCGATCCGGT CGACCGGCTG ATCGGCAATG CCTTGATCGA TTCACTCGAT GAAGTCGGCT ATCTCACCGA TCCCGTCGAG GATATTGCCC AGCGCCTCGG CACCTCCGTG CAACGGGTCG AACGCATGCT CGGTGTCGTT CAGACCTTCG ATCCCTCGGG GGTCGGCGCC CGCAACCTTT CCGAATGCCT TGCCATTCAA TTGCGCGAGC GCGACCGCCT CGATCCGGCC ATGCAGGCGT TGCTCAATCA TCTCGGGCTT CTCGCCAAGC GCGATTTTGC GGCCCTCCGC AAGATTTGTC AGGTCGATGA AGAAGATATT CTCGACATGC TGAACGAGAT CCGGCGGCTC GATCCGAAAC CCGGCCGTGC CTTTGGTTCA AGTTCGATCC AGCCGGTTGT TCCCGATGTC ATCGTGCGGC CACTCCCGGA TGGCTCCTGG CATGTCGAGC TCAATGCCGA TGTCCTGCCG CGCATTCTCG TCAACCACAC TTATGCGGCG CGCGTTTCCA AGGTCAAAGC CAAGGAAGCC GACAAGGCGT TCATGTCGAA TTGCCTGCAA ACCGCTAATT GGCTGACGAA GAGCCTCGAA CAGCGCGCCC GCACCATTCT GAAGGTTTCG AGCGAAATCG TCCGGCAGCA GGATGCCTTT TTCGCCAAGG GCGTTGAACA TTTGCGGCCT TTGAACCTCA AAACCATCGC GGATGCGATC GGCATGCACG AATCGACCGT CTCGCGCGTG ACCTCCAACA AATATATGAC CACGCCGCGT GGTCTGTTCG AACTCAAATA TTTCTTCACC GCCTCGATCA ACGCTCATAA TGGCGGAGAA GCCCATTCAG CCGAATCCGT GCGCTTCCGC ATCAAGCAGA TGATCGATCA AGAAAGCGCC AAGGACATTC TCTCCGACGA TGCGATCGTC GCGCGGCTGA AGGAAGCCAA TATCGACATC GCCCGGCGCA CCGTGGCCAA ATATCGCGAC AGCCTCAAAA TTCCATCCTC TGTCGAAAGG CGCCGTGAGA AGGCGTTGTA A
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Protein sequence | MALSTKLVMR QGQSLVMTPQ LLQAIKLLQF SNLELAAFVE DELERNPLLE RAEEAHEPYE PMLSTAYEAK DGHDFGDPEG HAFNESSEAD WNSESFATDR GSMEASLGTE LSNTFDDDRA PTPGDHHDAG LDGYGLEGAG LSATSWSGTS GLNGDGEATN LEAYVAAEAT LKDHLAGQLA IATSDPVDRL IGNALIDSLD EVGYLTDPVE DIAQRLGTSV QRVERMLGVV QTFDPSGVGA RNLSECLAIQ LRERDRLDPA MQALLNHLGL LAKRDFAALR KICQVDEEDI LDMLNEIRRL DPKPGRAFGS SSIQPVVPDV IVRPLPDGSW HVELNADVLP RILVNHTYAA RVSKVKAKEA DKAFMSNCLQ TANWLTKSLE QRARTILKVS SEIVRQQDAF FAKGVEHLRP LNLKTIADAI GMHESTVSRV TSNKYMTTPR GLFELKYFFT ASINAHNGGE AHSAESVRFR IKQMIDQESA KDILSDDAIV ARLKEANIDI ARRTVAKYRD SLKIPSSVER RREKAL
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