| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0272 |
|---|
| Symbol | |
|---|
| ID | 6198692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 314356 |
|---|
| End bp | 314805 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641704265 |
|---|
| Product | biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_001831416 |
|---|
| Protein GI | 182677270 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02801] TolR protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.512888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATGT CGATGGCGAC GGGAAGACGG GGCGGAGGAC GCGGCCGTCG TGGTGGGCGC
CGCTACGGAG CCATGGCCGA TATCAATATG ACGCCTTTCA TCGACGTCAT GCTGGTGCTG
CTCATCATCT TCATGGTTGC AGCGCCCCTG CTCGCGACCG GCGTGCCGAT TGATCTGCCG
CAGACCAAGG CGGCGGCGCT GAATGTCGAG CACAAGCCGC TGTCGGTGGC TGTCGATGAC
AAGGGCGACA TTTTCGTGAT GGACAAGCAG GTCGACAGCA GCACGCTCGC AGCCGCCCTG
AAAGACATGG CTAAGGAAGG CTTCGACGAG CGGATTTATG TGCGCGGCGC CAATACGGTC
AATTATGGCA AGATCGCCGA GGTCATGACA ATCATCACCG GCGCCGGCTA TAAAAAGGTC
GCGCTCGTGA CCGATCCGAG CAAGAACTGA
|
|---|
| Protein sequence | MGMSMATGRR GGGRGRRGGR RYGAMADINM TPFIDVMLVL LIIFMVAAPL LATGVPIDLP
QTKAAALNVE HKPLSVAVDD KGDIFVMDKQ VDSSTLAAAL KDMAKEGFDE RIYVRGANTV
NYGKIAEVMT IITGAGYKKV ALVTDPSKN
|
|---|
| |