Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0141 |
Symbol | |
ID | 6200932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 170001 |
End bp | 171875 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641704137 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_001831288 |
Protein GI | 182677142 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.764176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGTCGC CTGGGAAGAG CCGGGGTCCC GCCGCGTCGC GGCCCTCTCG CCTCGCCTTG TTGATGATCG CGGGGCTCGG CATGCCGGGC GGATTGTCCG ACGCTTTCGC CGAAACTCTT GCGCCCAGCA AAACGCCAGC AGCCAAAATT CCACTGGCCA AAATTCCGCT GACCGAGCGG CCTTTCATCA AAACCCAGTT TGCCAAGACA GATGCCGACG AGGCCGACAC ACTCCGGTCG GTCCGCGCGC CCTCTCCCCT GCCGGCTTCG TCCACGCCCC CGACGGTCCA GTCCGAAGAT TCCGTCAAAC CGGACAGTGC CACGGACAAA AAGCCGGAAA CAGCCATGGC GCCAGCCATT CCGGCGAGCG CGTTGCAAAA GCTGATCGAG GACCGTGCCG AGCGCCCTGT CACTGGCCCC CACATCACTG AACAAAGACG TGAGCGCGAG GCGATCGCGG CCTTCTACGC GGCGCGCGAT TTCGCACTGC TTTGGTTTAC AGATGGCCAT CCCAATCGCG CCGCGAGAAG CCTGTTGCCG CGTCTTGCGG CGGCGGCTGA AGATGGCCTT GATCTCGGCC CGCGTCTTCC CGCTTTGCCC CCGGACAATG CGAGTGCCGA TTCAAACCTC GATGAAACGC GGCAGGCGGC GCTCGATCTT GCCCTATCCG AGGCCGTCGT CGCCTATGGC CGGCAAGCAA GCGGCAGTCG GATCGATCCA CACGAGATCG GCAAGCTGAT CGGCGCGCGG CCAGAGATTG CCGACCCCTC CCTGATTCTC GCCAGCGTCG CGGCAGCAGG CCCCGAGGCC GGTACGATCC TGCGCGGTTT TAATCCGCAG CAGGAAGGCT ATGTCGCCTT GCGCGACAAA CTCGTCGCCA TGCGGCAAGA ACGCCAGCCG GTTGCTCGGC GGCTCATTCC CTCCGGCCCG CCTCTGCGCG TCGGTATGCG GGATCCGCGC GTCGCTTTGA TCCGGGCGCG GTTGAGCCTC GATGGCAAAC TCGACAAGGG TCAAACGGAA AACGGCGCGT CCGAAATCTA TGACTCCGAA GTCTCCATGG CCGTCGCCGA TTTTCAGCGG GCCAATGGCC TGCCCGCTTC TGGTGTTCTC ACCCCGCAAA CCAGCGCCAT TCTCTCGGGT GCGCGGCTAT CGGCCACCCC TTTATCGCCG CATGTCGAAC ATGAAATTCT TGCCAATATG GAGCGCTGGC GCTGGATGCC GCACGATCTC GGCCACGATC GGATCGAGGT GAACCTGCCT GATTTCGAGG TCGCCGTCAT CGAGAAGGAC GAGGTGGTGA GCCGTCACCG TGTCGTCATC GGCAAGGAAG AAACGCCGAC GCCGATCTTT TCCCATGTGA TGCAATTTCT GATCGTCAAT CCCTATTGGA ACGTGCCGGC CTCGATCCTC AAAAAGGAAA TGCTGCCGAA ACTCGCGGCC AATCCGAATT ATCTGCATCG CCTCGGCTAT GAAGTCTTCA AAAGGGATGG GCATCTCGTC GTGCGCCAGC CGCCCGGCGA ACGCAATGCG CTCGGCCGCA TCAAATTCAT GTTCCCCAAT GATTATGCGG TCTATCTCCA CGATACGCCA TCCAAGCATT ATTTCGAAGA AGACAAGCGC GCCTTCAGCC ACGGTTGCGT GCGGGTCGAC GAGCCCTATC ATTTTGCCGA AGCGGTCCTT GGACCGAAAT GGAGTGAAAG CCGCATCAAA GGCCTGTTCG GGGAGAAGGA ACGCTATATC ACCCTGCCGA AGCCCCTGCC CATTCATCTG GAATATTTCA CCGCCACCGT CGATCGGTTC GGACATCTCC ATTTGAGTGA GGATGTCTAT GGCTATTCGC AGAAGGTGAG AATAGCGCTC GGCCTTCAAG ACTAA
|
Protein sequence | MRSPGKSRGP AASRPSRLAL LMIAGLGMPG GLSDAFAETL APSKTPAAKI PLAKIPLTER PFIKTQFAKT DADEADTLRS VRAPSPLPAS STPPTVQSED SVKPDSATDK KPETAMAPAI PASALQKLIE DRAERPVTGP HITEQRRERE AIAAFYAARD FALLWFTDGH PNRAARSLLP RLAAAAEDGL DLGPRLPALP PDNASADSNL DETRQAALDL ALSEAVVAYG RQASGSRIDP HEIGKLIGAR PEIADPSLIL ASVAAAGPEA GTILRGFNPQ QEGYVALRDK LVAMRQERQP VARRLIPSGP PLRVGMRDPR VALIRARLSL DGKLDKGQTE NGASEIYDSE VSMAVADFQR ANGLPASGVL TPQTSAILSG ARLSATPLSP HVEHEILANM ERWRWMPHDL GHDRIEVNLP DFEVAVIEKD EVVSRHRVVI GKEETPTPIF SHVMQFLIVN PYWNVPASIL KKEMLPKLAA NPNYLHRLGY EVFKRDGHLV VRQPPGERNA LGRIKFMFPN DYAVYLHDTP SKHYFEEDKR AFSHGCVRVD EPYHFAEAVL GPKWSESRIK GLFGEKERYI TLPKPLPIHL EYFTATVDRF GHLHLSEDVY GYSQKVRIAL GLQD
|
| |