| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0117 |
|---|
| Symbol | |
|---|
| ID | 6200623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 133040 |
|---|
| End bp | 134305 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641704113 |
|---|
| Product | aminotransferase class-III |
|---|
| Protein accession | YP_001831264 |
|---|
| Protein GI | 182677118 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0673472 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCGC AACAAATAGG GGAAGCCTAT CGTCAGCGTC ACTGGCGCTT TCTTGCCGAT
CTTCAGAAAA AGGCGGGAAT GGAATTTGTC GTGGGGCGAC GCGAAGGGTC CCATATCTGG
AATGTCGAGA ATTCACGGCG CCTTCTCGAT TGCGGCAATA GCGGGGGCGT TCATTCTCTT
GGACATTGCA ATCCGGAAAT ACGACAGCTG ATTGCTGAGA GTTTGGAAAC GCTCGATGCG
GGCATGTGGG TGATGCCAAC CGAAGAAGCA TTGGCGTTCC AGGACACAGT CAATCGTGCG
GATTCGCCCA TTCCGGACTG CCGGACTGTT CTGACGTTGA GTGCCTCGGA CGCCATGGAT
GCCACGATCA TGTGGTCGTT TCGCGTCACC GGCCGCAAGA AGGTGCTGGC GTTCAAGCAT
GGCTATCATG GCCATAGTGG TTTTGCCGCG CTGGCGACGG GATCAGAGGC CGAGGGGCTT
TTGTCGCATT ATTCTCTTCC GGGCGATTAT AGCCTGTTTT TTGAGGATTA TGGCGATCTC
GACGCGATCG AAAGAACGAT CGATGCGTCC TGTGCGGCCA TCATCATGGA GCCTATGAAT
TATGAAACCT TCGAGCCCGC GCCTGATGGT TTTCTGGAAG GTGTCCAGGC TTTGTGCCGC
CGCCATTCGA CGCTTTTGAT TCTTGATGAG ACACGGTCGG GCCTTGGCCG TTCCGGCCGG
CTTTGGATGA GCGGCTTTTA TGATATCCAA CCCGACATCA TCATATCCGG AAAAGGATTG
GGCGGAGGCT ATTATCCCGT CGGCGCCTTG ATCGCTCGAT CAGATATTTA TGATCTCTGC
ATGAATAGTG GCCATTGGGG CTATATGGCG AGTCTTGCCG GCAGCCCCAT TGGCGCACGG
ATCGCCATGA AGGTTCTGGA TATTGTGCGG CGTCCGGAAC TTGTCGCGAA TGTCCACCTC
TTGGAGAGAG ATCTCACCAC GCTTTTTTTG GCGCTCAGCG CGAACTTTCC AGATCTCTAT
CGACCAGCCT GGGTCAGGGG AGGGATTGCC GCTCTCGGCC TTCAGGATGC GCAATTCGCC
TCGATGATCC AGCTTGAACT GTTTAGGCGT GGCGTGCTTT GCCACAGCAC CTCGCTCATT
ACGCCTTCCG TTGTCAAATT CTTCCCGTGC TTGACCAGCA CACCCTCAAT CGTCGAAGAG
CTTGGCGGTG CGCTCGAGGA TTGCGCGCAA TCCTTCCGCA AGCAGGAAAG GGTTTCAACC
TCGTAG
|
|---|
| Protein sequence | MDSQQIGEAY RQRHWRFLAD LQKKAGMEFV VGRREGSHIW NVENSRRLLD CGNSGGVHSL
GHCNPEIRQL IAESLETLDA GMWVMPTEEA LAFQDTVNRA DSPIPDCRTV LTLSASDAMD
ATIMWSFRVT GRKKVLAFKH GYHGHSGFAA LATGSEAEGL LSHYSLPGDY SLFFEDYGDL
DAIERTIDAS CAAIIMEPMN YETFEPAPDG FLEGVQALCR RHSTLLILDE TRSGLGRSGR
LWMSGFYDIQ PDIIISGKGL GGGYYPVGAL IARSDIYDLC MNSGHWGYMA SLAGSPIGAR
IAMKVLDIVR RPELVANVHL LERDLTTLFL ALSANFPDLY RPAWVRGGIA ALGLQDAQFA
SMIQLELFRR GVLCHSTSLI TPSVVKFFPC LTSTPSIVEE LGGALEDCAQ SFRKQERVST
S
|
|---|
| |