| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0047 |
|---|
| Symbol | |
|---|
| ID | 6201587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 46724 |
|---|
| End bp | 48316 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641704044 |
|---|
| Product | isocitrate lyase |
|---|
| Protein accession | YP_001831195 |
|---|
| Protein GI | 182677049 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2224] Isocitrate lyase |
|---|
| TIGRFAM ID | [TIGR01346] isocitrate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTATC AAGACCAAAT TACCGAGGTG AGCCAGCTCA TCAAGAGCAA GAACGGCACA
TGGGACGGCA TCAATGCCGA GGCCGTCGTC CGGATGCGCT TGCAGAACCG CTTCAAAACC
GGTCTCGATA TTGCCAAATA TACGGCAGCC ATCATGCGCC GGGACATGGC GGCCTATGAC
GCAGACACCA CCAAATATAC TCAGTCGCTC GGCTGCTGGC ACGGTTTCAT CGGCCAGCAG
AAGGTGATTT CGATCAAAAA GCATTTCGGC ACGACCGAAC GCCGCTACCT TTACCTCTCC
GGCTGGATGG TCGCCGCGCT GCGTTCCGAG TTCGGCCCGC TGCCCGACCA GTCGATGCAT
GAAAAGACCT CCGTCCCGGC GCTTATCGAG GAGCTTTACA CCTTCCTCCG CCAGGCCGAT
GCACGTGAGC TCAACGATAT TTTCCGCGCC ATCGACGCCG CCCGCAAGGC GGGAGACAGC
GCCAAGGCGA AAGAGCTTCT GACCCAGGCC GAAAATCACC AGACCCATGT CATTCCGATC
ATCGCCGATA TTGACGCGGG CTTCGGCAAC GCCGAAGCGA CCTATCTTCT CGCCAAGAAG
ATGATCGAGG CGGGCGCCGG CGCCCTGCAA ATCGAAAACC AGGTCTCGGA TGAAAAGCAA
TGCGGCCACC AAGACGGCAA GGTCACCGTG CCGCACGAGG ATTTCTTGGC CAAGGTGCGC
GCCTGCCGCT ATGCCTTCCT CGAACTCGGC GTTGATGATG GCATCGTTGT CACCCGCACC
GACTCTCTTG GCGCCGGTCT CACCAAGCAG ATCGCGGTCA GCCACAAGCC GGGCGATCTC
GGTGACCAGT ACAATTCCTT CCTCGACGTG GAGGAAGTTC CGGCTGGCGG CGGCGCCAAT
GGCGACGTCA TCATCAACCG CGATGGCAAG CTGTTCCGGC CGAAGCGGCT CCCGAGCAAC
CTCTTCCAGT TCCGCAAGGG CACGGGTGAG GACCGCTGCG TGCTCGATTC GATCACCTCG
CTGCAGAATG GCGCCGACCT TCTGTGGATC GAGACCGAAA AGCCGCATGT CGAGCAGATC
GCCGGCATGA TGGACCGCAT CCGCGCCGTC ATCCCGAACG CCAAGCTCGT CTACAATAAT
TCGCCCTCGT TCAACTGGAC GATCAACTTC CGTCAGCAAG TCTATGATGC CTGGAAGGAA
GCCGGCAAGG ATGTTTCCGC CTATGACCGC GCTGGCCTGA TGGATGTGAA ATATGACGGC
AGCGATCTTG CCGCCGAGGC TGACGAAAAA ATCCGCACCT TCCAGGCCGA CGCCTCGAAG
CGGGCAGGCA TTTTCCACCA CCTCATCACC CTGCCGACCT ATCACACGGC GGCGCTGTCG
ACCGATAACC TTGCCAAGGA ATATTTCGGC GAACAGGGGA TGCTCGGCTA CGTGCTGAAT
GTCCAGCGGC AAGAAATCCG CCAGAAAATC GCCTGCGCGA AGCACCAGAA CATGGCGGGT
TCCGACATTG GCGACGATCA CAAGGAATAT TTCGCTGGCG AAGCCGCGTT GAAGGCGGGC
GGCGCCGACA ACACGATGAA CCAGTTCGGC TGA
|
|---|
| Protein sequence | MSYQDQITEV SQLIKSKNGT WDGINAEAVV RMRLQNRFKT GLDIAKYTAA IMRRDMAAYD
ADTTKYTQSL GCWHGFIGQQ KVISIKKHFG TTERRYLYLS GWMVAALRSE FGPLPDQSMH
EKTSVPALIE ELYTFLRQAD ARELNDIFRA IDAARKAGDS AKAKELLTQA ENHQTHVIPI
IADIDAGFGN AEATYLLAKK MIEAGAGALQ IENQVSDEKQ CGHQDGKVTV PHEDFLAKVR
ACRYAFLELG VDDGIVVTRT DSLGAGLTKQ IAVSHKPGDL GDQYNSFLDV EEVPAGGGAN
GDVIINRDGK LFRPKRLPSN LFQFRKGTGE DRCVLDSITS LQNGADLLWI ETEKPHVEQI
AGMMDRIRAV IPNAKLVYNN SPSFNWTINF RQQVYDAWKE AGKDVSAYDR AGLMDVKYDG
SDLAAEADEK IRTFQADASK RAGIFHHLIT LPTYHTAALS TDNLAKEYFG EQGMLGYVLN
VQRQEIRQKI ACAKHQNMAG SDIGDDHKEY FAGEAALKAG GADNTMNQFG
|
|---|
| |