Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0037 |
Symbol | |
ID | 6201559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 39217 |
End bp | 40068 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641704033 |
Product | short chain dehydrogenase |
Protein accession | YP_001831185 |
Protein GI | 182677039 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.40951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGAAA AAATCTGGTT CATCACAGGT GCATCGAGGG GCTTTGGCCG CATCTGGGCC GAAGCTGCGC TTGAACGTGG CGACAAAGTT GCCGCCACAG CCCGCAATAC GGAAAGCCTT TCGGAGCTAG CCAGCCGTTT CGGCGATAAG GTGTTGCCTC TTCAGCTTGA CGTCACCGAT GCAGATGGCG TCAGGCGAGC AGTCGCAGAC GCGCACCGGC ACTTCGGGCG GCTGGACGTT GTCCTGAACA ACGCAGGATA TGCATTGGTC GGCGCGATCG AGGAAGTCGA TGAGAAGGAT CTTCGCGCCG AGCTGGACAC CAATGTGTTC GGAATGCTCC GCGTCATCCA GGCTTCTCTT CCCTATCTGC GGGCGCAGGG GAGTGGTCAC ATCGTCAGCG TTTCTAGCGT GGCAGGCATC GTCGCCAATC CGATCGCAGG CGCCTACAAC ATGTCGAAAT GGGCAGTCGA AGCGATGCAC GAGGCGCTTG CCCAGGAAGT CGAAGGCTTT GGCATCAAGG TGACGCTGAT CGAGCCCGGC GCTTATGCCA CAGATTTTGC CAGCGCCACC TCCCTCAAGA TTTCAGAAGG CCTTGAGGCT TATGCCCCAC TGCGGGAGCA AGCGTTCACA GCCGGAGCGA AGATGGAATT CGGCGATCCG CGTGCGACAG CTGCGGCCAT CCTGAAGCTG GTGGATGTGG AAACGCCGCC GTTGCGTTTT TTCCTCGGCA CGGAAGGTCT GCCAGTGGCA CGCGCGGCCT ATTCAGCGCG GCTTTCCGCC TGGGAGGCAT GGGAGGCCGA ATCCAACGCC GCTCAGGGCA ACGGCAAACA GCACACCATA GCGACGCTGT AA
|
Protein sequence | MSEKIWFITG ASRGFGRIWA EAALERGDKV AATARNTESL SELASRFGDK VLPLQLDVTD ADGVRRAVAD AHRHFGRLDV VLNNAGYALV GAIEEVDEKD LRAELDTNVF GMLRVIQASL PYLRAQGSGH IVSVSSVAGI VANPIAGAYN MSKWAVEAMH EALAQEVEGF GIKVTLIEPG AYATDFASAT SLKISEGLEA YAPLREQAFT AGAKMEFGDP RATAAAILKL VDVETPPLRF FLGTEGLPVA RAAYSARLSA WEAWEAESNA AQGNGKQHTI ATL
|
| |