| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3806 |
|---|
| Symbol | |
|---|
| ID | 6198013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010580 |
|---|
| Strand | - |
|---|
| Start bp | 116930 |
|---|
| End bp | 117910 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641703939 |
|---|
| Product | transaldolase B |
|---|
| Protein accession | YP_001831091 |
|---|
| Protein GI | 182676944 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00874] transaldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.390141 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCCAA TGCCTAATGT GCAAAAAAAC AAGCTTGAAC AATTGCGCGA CATGTCGATC
ATCGTTGCCG ACACTGGCGA CATCGAATCA ATCCGGCAGT TCATGCCGAC CGATGGCACG
ACCAACCCGT CCTTGATTCT GAGAGCTGCG ACGAACCCCA CCTATGCTCA TCTCGTTGAC
GAGGCTGTGG CATGGGGGCG GCGGCAAGTT GGCGACCGCG ACGCAATCAT CGCAGCCACG
TGCGATCGTG TGGCATTGAA CTTCGGCACA GAGTTGACGA AGATCGTCCC CGGTCGCGTG
TCGACCGAGG TAGACGCCGA TCTGTCTTTC AACACAGCTC TTTTGCTGGA TAAGGCGCGG
TGCTTGATCG CCAATTATGA AAGCCGCGGT ATTGGGCGTG AACGCGTGCT TATCAAGCTC
GCAAGCACTT GGGAAGGTAT CAAGGCGGCT GAGATTCTCG AGAAAGAGCG GATCAATTGT
AACCTGACGC TTCTCTTCTC CTTCGCGCAA GCGGTCGCCT GCGCTCAGGC GGGCGTATTC
CTGATCTCTC CTTTCGTCGG CCGTATCTTC GACTGGTATG TGAAGTCGAC TGGCGAGCAT
TATACACCCG ATTCCGATCC TGGAGTCCTG TCAGTCGCGC GTATCTTCAA GCATTACAAG
AGCCAAGGCT ACGAAACCAT CGTCATGGGC GCCTCATTCA GGAATATTGG TCAGATCGAA
GCGCTGGCTG GCTGTGACCG ACTGACCATT GCGCCGGGGC TTCTCGAACA ACTCGCCGAA
GACACCACAG GCGTACTTGT TCGCAAGCTC GACGCAAATA CCGTCACGCA ATCTGGGAGG
GAGGGTGCAC TCACCGAAGC CACCTTCCGC TTCGAACATA ATGAAGACGC CATGGCAACT
GAGAAGCTCG CCGAAGGTAT CCGTCTGTTT GCGGAAGACC TCAACAAACT TCGCGCGTTT
ATCGCCATGA AAATCGTTTG A
|
|---|
| Protein sequence | MRPMPNVQKN KLEQLRDMSI IVADTGDIES IRQFMPTDGT TNPSLILRAA TNPTYAHLVD
EAVAWGRRQV GDRDAIIAAT CDRVALNFGT ELTKIVPGRV STEVDADLSF NTALLLDKAR
CLIANYESRG IGRERVLIKL ASTWEGIKAA EILEKERINC NLTLLFSFAQ AVACAQAGVF
LISPFVGRIF DWYVKSTGEH YTPDSDPGVL SVARIFKHYK SQGYETIVMG ASFRNIGQIE
ALAGCDRLTI APGLLEQLAE DTTGVLVRKL DANTVTQSGR EGALTEATFR FEHNEDAMAT
EKLAEGIRLF AEDLNKLRAF IAMKIV
|
|---|
| |