| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2265 |
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| Symbol | |
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| ID | 6204176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010579 |
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| Strand | + |
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| Start bp | 36930 |
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| End bp | 37892 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641703819 |
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| Product | conjugal transfer ATPase TrbB |
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| Protein accession | YP_001830971 |
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| Protein GI | 182682773 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000182151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAGG ACGAGGAAAA TCACGGATCA GTCAGTACCC GTGCCATTGA AAAGCTGCGT
CGCGATTTAG GACCTGTCGT TATGGGTGCG CTTAACGATC CTGAGACAGT TGAGGTTCTA
CTGAACGCAG ATGGCGGAAT CTGGCAAGAA TGCCTTGGGA AGAAGATGCA TCAGATCGGT
ATGATGACGC CGCAACGAGC TGAAGCGGTT GTTAAGACTG TTGCTGGCTA TCACGGAAAA
ACGGTGACGC GCCTGAACCC GCTTATTGAA GGTGAATTGC CTATTGATGG TTCGCGCTTC
GCAGGACAGC TCCCCCCTGT GGTTGAAAAT CCAACCTTCG CGATTCGTAA AAAAGCAATC
GCAATCTTTA CCCTTGAACA ATACGTTGAG GCCGGAATCA TGACGCTCGA ACAGGCTCAG
GTCATTCGGG CAGCAGTGAA GGCGCATCGA AACATTCTTG TGATTGGCGG CACTGGCTCT
GGTAAGACAA CGCTAATCAA CGCAATCATC TACGAGATGG TGCAGATCGA TTCATCAGAA
CGCATTTGTA TCATTGAGGA CACTGGTGAA ATACAATGCG CCGCCTTGAA TAAGGTCCAG
TACCACACCA CGCTGGAAAT CACGATGACT ATGCTGCTCA AGACGATCCT ACGGATGCGT
CCTGATCGTA TTCTCGTTGG CGAAGTGCGT GGCCCCGAGG CATTAGACCT TTTAGACGCA
TGGAATACAG GGCACGAAGG AGGTGCCGCC ACATTGCACG CAAACGACGA GCACTCTGCT
CTTACCCGTT TGAAGTCACT CATTAGTCGT AATGAATCTG CTCCAGACGC TATCGAACCC
CTTATCGGCG AAGCAGTCCA TGTGATTGTT CACATTGCCC GCACCGATGT TGGCCGCCGC
GTACAAGGAA TTATCGAGAT TCAAGGATAT AAAAATGGTT GCTATATCAC ACGAAATATC
TGA
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| Protein sequence | MMQDEENHGS VSTRAIEKLR RDLGPVVMGA LNDPETVEVL LNADGGIWQE CLGKKMHQIG
MMTPQRAEAV VKTVAGYHGK TVTRLNPLIE GELPIDGSRF AGQLPPVVEN PTFAIRKKAI
AIFTLEQYVE AGIMTLEQAQ VIRAAVKAHR NILVIGGTGS GKTTLINAII YEMVQIDSSE
RICIIEDTGE IQCAALNKVQ YHTTLEITMT MLLKTILRMR PDRILVGEVR GPEALDLLDA
WNTGHEGGAA TLHANDEHSA LTRLKSLISR NESAPDAIEP LIGEAVHVIV HIARTDVGRR
VQGIIEIQGY KNGCYITRNI
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