| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2159 |
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| Symbol | |
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| ID | 6202003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 2439750 |
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| End bp | 2441981 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641703673 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001830829 |
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| Protein GI | 182682669 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.171562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGTA CGCCCAAGCT TATTTATACA CTTACAGACG AGGCGCCGTT CTTGGCAACG
CAGTCGCTAT TGCCAATTAT CAAGGCTTAC ACCAAGGTTG CTGGTATCCA GGTTGAGACA
CGTGATATTT CTTTGGCCGG GCGTATCTTG GCGCAGTTTC CTGATGTGTT GACCGAGACG
CAAAGAGTCA GTGACGATCT GGCTGATTTG GGGCAAATGA CGGCTAGTCC GGATGCCAAC
ATTATTAAGT TGCCTAATAT CAGTGCTTCA ATGCCGCAGT TAAAGGCTGC TATCAAAGAG
TTGCAGGAGC AGGGCTATTT GTTGCCGGAT TATCCGGATG AACCAAAAAA CAGTGCGCAA
AATGATGTCA AGATGCGCTA TGACAGGGTG AAGGGTAGTG CGGTCAATCC CGTACTGCGT
GAAGGCAATT CTGATCGCCG TGCCCCGTTG TCAGTGAAGA ATTATGTGCG TAAGTATCCG
CATCGGATGG GGGCGTGGAG TACTACATCC AAGTCGCATG TCGCACATAT GGAGGGCGGT
GATTTTTTTG GTAGTGAACG TTCGGCTGTA CTCGCTCAGG CTGGTATGTT GAAGGTCGAA
CTGATTGCTA AGGATGGCAC GGTGACGGTA CTCAAGGATA AGGTTGCAGT GAGTGCCGGT
GATATTGTGG ATGCTGCGGT GCTGAGTAAG CAGGCATTGG CTGTGTTTGT TGCTGCACAG
ATGAATGATG CGAAGTCACA GGGGGTGCTG TTTTCGGTAC ACCTGAAGGC GACGATGATG
AAGGTGTCCG ATCCGGTGAT ATTTGGGGTG TTTGTTTCAG AGTTCTACAA AGAGGCTTTG
GCCAAGCATG CTGACACGTT GAAACAGGTC GGTTTTGATC CTAACAATGG TATTGGCGAT
TTGTACGCAC GCATTGTTGC GTTGCCGGAG GAGATCCAGG CAGTCATCAG GGCTGATGTG
CAGGCTCAGT ATGCCAAACG TCCTGGTTTG GCGATGGTTA ATTCTGTAAA GGGGATCACT
AATTTGCATG TGCCTAGTGA TGTGATTGTG GATGCGTCGA TGCCGGCGAT GATCCGTAGT
TCTGGGCAGA TGTGGAACGT TGCAGGGACG CTCCAAGACA CTAAAGCAGT GATTCCGGAT
CGTTGTTATG CCGGCGTGTA TAAAACTGTC ATTGATGATT GCAAGTTACA CGGTGCTTTT
GATCCAGTGA CGATGGGTTC GGTGCCCAAT GTCGGTTTGA TGGCGCAGAA GGCTGAGGAA
TATGGTTCGC ACGACAAAAC GTTTCAGGTA CAGAGTGGGG GTGTAGTCCG TGTCAGTGAT
GATCGGGGTG AGGTGTTGTT CGAGCATTCG GTAGAGGTGG GTGATCTTTG GCGCATGTGC
CAAACGAAGG ATGCACCGAT CCAGGATTGG GTCAGGTTGG CGGTGGAACG TGCCCGTCTG
AGTCATGTTC CGGCAGTGTT CTGGTTGGAC AGCGCCCGTG CGCATGATGT GCAGGTGATT
GCAAAAGTTG AGCGTTATTT AAAAGATCAC GATACCAACG GTTTGGATAT ACGTATTATG
TCGCCGGTGG CAGCGATGGA ATTTTCGCTG GCCCGTATTC GTAAAGGTCA GGACACGATT
TCGGTGACCG GTAATGTGTT GCGGGATTAT TTGACCGATT TATTCCCAAT CATGGAATTG
GGCACCAGTG CCAAGATGCT TTCCATTGTT CCGTTAATGG CGGGAGGTGG TTTGTTTGAA
ACTGGTGCCG GTGGTTCCGC GCCGAAGCAT GTACAGCAAT TTACTGAGGA GAATTACTTG
CGTTGGGATT CGTTGGGTGA GTTTCTGGCG TTGGCTGCAT CGTTGGAGCA TCTTGGTAAC
CGCTATGATC ATGTTGCTGC AAAGGTGTTA GCGAAAGCGC TGGACGTGGC TAACGGTCAA
ATTTTGGATA ACAACAAATC TCCTGCGCGT GAAATCGGTG AGTTGGATAA TCGTGGTAGC
CATTTTTATC TCGCTTTGTA TTGGGCTCAG GCATTAGCTG CACAGGATGA GGATGTTGTG
TTGCAGGTTA AGTTTGCATC TTTGGCTAAA GTGCTGAGTG AGCATGAGAT AACCATCGTT
GCTGATCTCA ATGCGGTTCA GGGATCTCCA GTGGATATTG GTGGTTATTA TCATCCTGAT
TTGGCTAGGG TTGCTGCTGG GATGCAGCCT AGTAAGACCT TCAACGATGC GTTGAGGTTG
TTCTCGAGTT GA
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| Protein sequence | MSSTPKLIYT LTDEAPFLAT QSLLPIIKAY TKVAGIQVET RDISLAGRIL AQFPDVLTET
QRVSDDLADL GQMTASPDAN IIKLPNISAS MPQLKAAIKE LQEQGYLLPD YPDEPKNSAQ
NDVKMRYDRV KGSAVNPVLR EGNSDRRAPL SVKNYVRKYP HRMGAWSTTS KSHVAHMEGG
DFFGSERSAV LAQAGMLKVE LIAKDGTVTV LKDKVAVSAG DIVDAAVLSK QALAVFVAAQ
MNDAKSQGVL FSVHLKATMM KVSDPVIFGV FVSEFYKEAL AKHADTLKQV GFDPNNGIGD
LYARIVALPE EIQAVIRADV QAQYAKRPGL AMVNSVKGIT NLHVPSDVIV DASMPAMIRS
SGQMWNVAGT LQDTKAVIPD RCYAGVYKTV IDDCKLHGAF DPVTMGSVPN VGLMAQKAEE
YGSHDKTFQV QSGGVVRVSD DRGEVLFEHS VEVGDLWRMC QTKDAPIQDW VRLAVERARL
SHVPAVFWLD SARAHDVQVI AKVERYLKDH DTNGLDIRIM SPVAAMEFSL ARIRKGQDTI
SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGLFE TGAGGSAPKH VQQFTEENYL
RWDSLGEFLA LAASLEHLGN RYDHVAAKVL AKALDVANGQ ILDNNKSPAR EIGELDNRGS
HFYLALYWAQ ALAAQDEDVV LQVKFASLAK VLSEHEITIV ADLNAVQGSP VDIGGYYHPD
LARVAAGMQP SKTFNDALRL FSS
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