| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2157 |
|---|
| Symbol | |
|---|
| ID | 6203624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 2436914 |
|---|
| End bp | 2437255 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641703671 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_001830827 |
|---|
| Protein GI | 182682667 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.336694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGACT ATGTTCTACA TATCAGCGAT GCCAATTTCG ATGCCATGGT GCTGCTATCC
GATCAGCCTG TATTAGTGGA CTTCTGGGCT AAATGGTGCG GCCCATGCAA AATTATCTCT
ACCCTACTTG ATGATTTAGC CCAAAGCTAC GAAGGGAGAT TAAAAATTGC CAAAGTCGAC
ATCGACGAGA ACCGCGCACT AGCGATTAAA TATCACGTGT GTTCTATCCC CATGCTGCTA
CTGTTCAAAG ATGGTCAAGT TCAAATTACC CAGACCGGCG CCGTCGGAAA GGGTCGTCTA
ACCCAAATGA TTGACAAAGT GCTGGCAAAC ACCGACTCAT GA
|
|---|
| Protein sequence | MSDYVLHISD ANFDAMVLLS DQPVLVDFWA KWCGPCKIIS TLLDDLAQSY EGRLKIAKVD
IDENRALAIK YHVCSIPMLL LFKDGQVQIT QTGAVGKGRL TQMIDKVLAN TDS
|
|---|
| |