Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_2146 |
Symbol | |
ID | 6203172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 2423418 |
End bp | 2424779 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641703660 |
Product | multidrug efflux protein |
Protein accession | YP_001830816 |
Protein GI | 182682656 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTCT CGTTTGTGAT ATCCCGCTTT GGTTCCGAAG TTCGTCCTAC TCTTTTGCTT GCGCTGCCGC TCGTTTTGGG TCACGTTTCC ACTGGTCTGA TCGGCTTTGT ACTTAACGTT ATTGCTGGTC ATCACTCTAC CGTCACTCTA GCGGCATCGA CTATCGGCAC TGCATTGCTT TGGTTGCCGA TGTTGGTACC CATGGGTACG TTGATTTCGT TAACGGTGTT GGTATCGCAA TTGCATGGTG CTGAGCGTGA ACGGGACATT GGGCCTTTGT TCCGCCAAGC GTTGTGGCTG GCCATGCTGT TGGGGTTGGT GATGTTCACT TTCCTCAGTG TGGTGCCAGC CTTGTTGCCG CTCTTTGGTA TCGTCCCGGA TATCGTTCCG GGTGCTGCTA AGTTTTTGCA TGTAGTGCGT TGGGGGAGTT TGGCATTCCC TCTTTACTTC TGTATGCGTT ATTTCTGTGA GGGAATGCAC TGTACTTTTC CAACGATGCT TCTGGGTTTT GGTGGGTTGC TAGTGCTGGT GCCATTGAGT TATGCGTTGA CATACGGTCG TTTTGGTTTT GCCGAGTATG GTGTTGAGGG CTTGGGGATC GCAACAGTGA CGGTCATGTG GCTACAGGCG GTTGTATTTG CGTTGTACTT GTGGAGATCA CGTCGCTTCG CCCATCTGCA GCTATTTGCG CATCTGGAAT TGCCGTGCTG GGCACGTATC CGTGATCTGT TGAATATAGG ATTACCCATC GGCATTAGTA TTTTGATGGA GGGCGGATTA TTTATTGTCA CCACGTTGCT GATTGGTCGG TTTGGTACTG ATGAAATTGC CGCGCATCAA ATTGCCCTAA GTGTTGCTCA ATTGTGCTTC ATGATCCCGA TGGGTGTAGC TGAGGCAACC ACGGTGCGAA TCGGCCATGC TGTGGGTCGT TGCGATCTTT TGGTGATGCG CCGTGTCGCT TGGGCTGGTT ATGCAATCGT GATCGGGACG CAGACACTCT CAGCAAGTGT GCTTTTGCTC GGATATGACG TGATTGTAGC CGCTTATACG GATGATTTGG TGGTGGCGTC TCTGGCTTCT AAATTACTGT TGTTTGCGGC TATATTCCAG TTCCCGGATG GTCTCCAGAT GCTTTCGTCC GGTGTATTAC GTGGGATGAA GGACACCCGG GTGCCGATGC TGCTGGCGAT GATCTCGTAT TGGGGTTTAG GTATGCCGCT TGGTCTTGGC CTTGGTTTTG CCTTGGAATG GAATTCTCGC GGTATGTGGA TCGGCTTAAT CATTGGCTTG ACTGCAGCTG CATTGTTGCT TGGTTGGCGA TTTCGTGTGG TTAGCGAGCG CATGTTTGCC GGTATTCCCT AA
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Protein sequence | MAVSFVISRF GSEVRPTLLL ALPLVLGHVS TGLIGFVLNV IAGHHSTVTL AASTIGTALL WLPMLVPMGT LISLTVLVSQ LHGAERERDI GPLFRQALWL AMLLGLVMFT FLSVVPALLP LFGIVPDIVP GAAKFLHVVR WGSLAFPLYF CMRYFCEGMH CTFPTMLLGF GGLLVLVPLS YALTYGRFGF AEYGVEGLGI ATVTVMWLQA VVFALYLWRS RRFAHLQLFA HLELPCWARI RDLLNIGLPI GISILMEGGL FIVTTLLIGR FGTDEIAAHQ IALSVAQLCF MIPMGVAEAT TVRIGHAVGR CDLLVMRRVA WAGYAIVIGT QTLSASVLLL GYDVIVAAYT DDLVVASLAS KLLLFAAIFQ FPDGLQMLSS GVLRGMKDTR VPMLLAMISY WGLGMPLGLG LGFALEWNSR GMWIGLIIGL TAAALLLGWR FRVVSERMFA GIP
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