Gene XfasM23_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_2145 
Symbol 
ID6203728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp2421434 
End bp2423335 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content50% 
IMG OID641703659 
Productsignal peptide peptidase SppA, 67K type 
Protein accessionYP_001830815 
Protein GI182682655 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGT CTGTGCCTAG AAATCCCATT GCCCGTTTCT TTATTGGCTT ATGGGGAGCG 
ATGAATTTTA CCCGCCGCTT AATTCTCAAT TTGGTGTTTT TCGGTTTCTT GTTTTTCTTG
TTATTGATGA TGTTAATTGG AATGACGCAC GGCTTGAAAG GCAAGCAGCT CGACGATCGC
ACGACTCTAT TGATTGCGCC GCAAGGCACA TTGGTGGAAC AGTTCAGTGC CGATCCGGCC
AGTCGTGCAT TAGCCAAAGC GACTGGTGAT AAGAGTGGGC AGGAAGTTCA ACTGCGTGAT
CTGATCCGTG TGATTGAGGC TGCGGCTAAG GATAAGAAGA TTGAACGTGT TCTGCTGGAT
TTGGACAAGT TGCAGCCATC AGGGTATGCC TCATTGCGTG AGGTCGTTGC TGCGTTACAG
AACCTCAAAG ATTCAGGGAA ACAGTTAGTT GCTTTCAGTG AAAGTATGAC TCAGTCGCAG
TATCTGCTTG CCGCACAGGC GGATGAGATT TATTTGGATC CAATGGGCAG TGTTTTGCTT
GAGGGTTTGG CTCACTACCG TCAGTATTTC CGCAAGGGAT TACAAGAAAA ATTGGGTGTG
GATGTTCATC TTTTCCGTGT CGGCGAATAC AAATCCGCGG CTGAGCCTTT TGTTCTTGAT
GCGGCCTCAG CCGATGCCAA GGAGGCCGAT TTGTTCTGGA TGAACGATAT ATGGCAACGC
TATTTGGCCG ATATCGCTAA GGCACGTAAG CTCGATTCGG CGCACCTCAA TACTATAGTC
GAAAGACTGC CGCAGGATAT TGCTGCTAAT CATGGTGATT TGGCCAAGTA TGCATTGGCG
CAGAAACTGG TAGATGGCTT GAGAACTCGC GAGCAAGTGA ACCAGTTAAT GATCCAGCGT
GGTGTTGCCG ATAAAAAGGC CGATGGTGGT TTCCGTAATG TGGACTTCGG TACTTATTTA
AGTTTGCTGG ATGCACAGAG TGCGCTACTA GGCACGTCCT CGCAGATTGC CGTCGTTGTG
GCAGCGGGTG AAATAAAAGG AGGTGATCAG CCTGCCGGTT ATATTGGTGG TGAGTCGACC
AGTATGCTTT TGCGTAAGGT GCGTGATGAA GACGCGGTCA AAGCGGTGGT GCTTCGTGTA
AATTCTCCCG GTGGAGAAGT CTTCGCTTCT GAGCAGATTC GCCGTGAAGT CGTTGCACTG
AGGAAGGTTG GCAAGCCGGT CGTGGTGTCG ATGGGTGATA TGGCTGCTTC CGGAGGGTAT
TGGATTAGCA TGGATGCTGA TCGCATTTAT GCTGATCCAT CGACGATCAG TGGTTCGATT
GGTATCTTCG GCTTGGTACC CAATATCACT CGTACGCTTG ATAAAGTGGG AGTGCACACG
GATGGCGTGG GTACGACCCG TTTTGCAGGT GCACTTGATA TCACTCGTGC GCTGGATCCG
CAGGTGGGAC AGATATTCCA GAATGTGATC GACAAAGGCT ACGCAGATTT CACAACTAAG
GTTGCGCAGG CGCGTCACCG CTCCGTGAAA GAGATTGACA GTATTGCTCG CGGTCGTGTA
TGGAGCGGCG CGCAGGCGAA AGAACGTGGT TTGGTCGATG AACTTGGGGG AGTGCGCGAG
GCGATTACTG ATGCTGCAAA GCGTGCCAAG CTTGGCGAGG GCCACTACAG TGTGCGTTAT
GTTGATAAGG CAGTCAGCCC ATTTATGCAG TTCATCATCA ACATGATGTC CACTCGGATT
GGGAACTGGG CATTGGGAGA TTCAGGCTTG GCTCGGGTGC TGCTCACCCG TATTTCTCCG
GAAACAGAGG TGCAGTTGCG TTTTGTTGAA GATGCAGTGC GTGAGGCCAA AACGGGCATG
CTTCCAGTCA AACCCTTGGT TTACTGTTTC TGTGGACTTT AG
 
Protein sequence
MNQSVPRNPI ARFFIGLWGA MNFTRRLILN LVFFGFLFFL LLMMLIGMTH GLKGKQLDDR 
TTLLIAPQGT LVEQFSADPA SRALAKATGD KSGQEVQLRD LIRVIEAAAK DKKIERVLLD
LDKLQPSGYA SLREVVAALQ NLKDSGKQLV AFSESMTQSQ YLLAAQADEI YLDPMGSVLL
EGLAHYRQYF RKGLQEKLGV DVHLFRVGEY KSAAEPFVLD AASADAKEAD LFWMNDIWQR
YLADIAKARK LDSAHLNTIV ERLPQDIAAN HGDLAKYALA QKLVDGLRTR EQVNQLMIQR
GVADKKADGG FRNVDFGTYL SLLDAQSALL GTSSQIAVVV AAGEIKGGDQ PAGYIGGEST
SMLLRKVRDE DAVKAVVLRV NSPGGEVFAS EQIRREVVAL RKVGKPVVVS MGDMAASGGY
WISMDADRIY ADPSTISGSI GIFGLVPNIT RTLDKVGVHT DGVGTTRFAG ALDITRALDP
QVGQIFQNVI DKGYADFTTK VAQARHRSVK EIDSIARGRV WSGAQAKERG LVDELGGVRE
AITDAAKRAK LGEGHYSVRY VDKAVSPFMQ FIINMMSTRI GNWALGDSGL ARVLLTRISP
ETEVQLRFVE DAVREAKTGM LPVKPLVYCF CGL