| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2121 |
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| Symbol | |
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| ID | 6203198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 2391293 |
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| End bp | 2392972 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641703637 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001830793 |
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| Protein GI | 182682633 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000963892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGTGC CGATTCGCAT CCTTACAGTT CCATTGTTGT TTTTTATCGT GTTTCCCGCA
GTTGCTGCTC GCGCGGCTTT TGGCGATCCG GCGACTCAGG TGAGTCCTTG GTTGGGGCCC
GTTTTGGTGG CCGAGTTTGA ATTGCAATCT GGGCAGCTGA GCAATGCGGC GAGATGGTAT
TTGCAGGCTG CACGTTTTCA GCCTGGGAAT GTCGGTCTCG TTGAGCGTGC CGCTCGCATT
GCGATGTTGG CGGGTGATGA TGTCGGTGCG GAGCGTGCTT TAGCGATCTG GGGTGTCCGC
GCGCCTAAGT CGTTGTCAAT GCGTGAGGTC GAAGTATCAC TCGCTATGCG TCGCCAGCAG
GTCAATATGG CGCGCCATGG GCTTACCGGG TTGCTGCGTA ATCCTGATCC CCGTAGTTGG
CGTTATGCGT TGATTGCACT CAACAATGGC GGCCGTGATC CGCAGCTGTC GGTTAGGTTG
ATGGAGGAGT TGGTTCGCCG CGGTGATATC CCTAATCGGA TTGAGGTCTG GCAGGAGTTT
GGTCGTTTGG CGTTGCGTTT GGAGCAGCCG ATATTGGTGA AGCACATCAT CGACCAGTTG
ATGCTGCGCT TTCCTAAGGA TCCACGTGTG GCGTTGTTGC AGGCTGCTCA GTTGCAGCAG
GCGGGTAAGC GTAAGCAGGC TCTTTCTAAG CTAAAGGAGG TTGAGCGGCG TGCGGTAGCT
GATGTGGATC TGCGTGGGGC ATTAGCTTTG ACTTATGAAG GCATGGGTGA AGGTAAGGCT
GCTGCACGGG TGCTTGCCAC TGGTCCGCAG GATGTTCAAA CCTATGGTTT GCGTGCTTCG
TTGCTAGCTC GCCAGCAGGA GAGGCAGGCG TTGATTGCTT TGTATGAGGA GTTGAGTGGT
GGGAGCGGGA CGCATGAGCC GGAGAAGCGT CTTCTGTTAG GTAAGATTGC TGAGTTTCTG
ATGCGTTACG AGGATGCGCT TTCTTGGTAT CACGGGGTGT TGGATGGGGA GCTGCGTGGT
GAGGCGGTGT TGCGTGCGGT CAGCGTGTTA TTTGAGTTGA AGCGCTATGA TGAGGCGTTC
GATGAGGTGC ATCGCTTGCA GGGGGATGCT GCGATTGATG ATGAGCAGCG TCGCGATGCT
TATTTGGTTG AGGCTGAGTT AAAACAGCGC TTGGGTGACT CTGCAGGTGA GTTGAACGCT
TTTGCGCGTG GATTGGATGA GTTTCCTAAC GACAGTGAGC TTCTTTATGT GCGTGCGCTG
GCTTGGGAGC GTCGTGATGA CATCGTTCAG GCTGAGGCCG ATTTGCGTAA GTTGCTGGTT
GCCGATCCGG GCAATGTGGT CGCGTTGAAT GCGCTTGGTT ATACCTTGGC CAACCATACG
ATCCGCTACA AGGAGGCGTT GGCGTTGATT GATCGTGCCC GTGCGGCTGA GCCTGATAAT
CCTTCGATTA TCGATAGTTA CGGTTGGGTC ATTTATCGAC TGGGACGGGT TAAGGAGGCT
TTGGTGGAGC TTAAGCGTGC TTGGTCTTTA GCTAAGGAGC CAGAGATTGC TGTGCATGTC
GGTGAGGTGC TGTGGGCGGA TGGTCAGCGC GAGGAGGCAC GGTACTATTT TGAGGAAGCG
CGTAAATTGG ATCCGGATAA TTTGGTGTTG CGCCATGTAC TGGAAAAGTT TGGGTTATGA
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| Protein sequence | MLVPIRILTV PLLFFIVFPA VAARAAFGDP ATQVSPWLGP VLVAEFELQS GQLSNAARWY
LQAARFQPGN VGLVERAARI AMLAGDDVGA ERALAIWGVR APKSLSMREV EVSLAMRRQQ
VNMARHGLTG LLRNPDPRSW RYALIALNNG GRDPQLSVRL MEELVRRGDI PNRIEVWQEF
GRLALRLEQP ILVKHIIDQL MLRFPKDPRV ALLQAAQLQQ AGKRKQALSK LKEVERRAVA
DVDLRGALAL TYEGMGEGKA AARVLATGPQ DVQTYGLRAS LLARQQERQA LIALYEELSG
GSGTHEPEKR LLLGKIAEFL MRYEDALSWY HGVLDGELRG EAVLRAVSVL FELKRYDEAF
DEVHRLQGDA AIDDEQRRDA YLVEAELKQR LGDSAGELNA FARGLDEFPN DSELLYVRAL
AWERRDDIVQ AEADLRKLLV ADPGNVVALN ALGYTLANHT IRYKEALALI DRARAAEPDN
PSIIDSYGWV IYRLGRVKEA LVELKRAWSL AKEPEIAVHV GEVLWADGQR EEARYYFEEA
RKLDPDNLVL RHVLEKFGL
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