| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2117 |
|---|
| Symbol | |
|---|
| ID | 6202080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 2387862 |
|---|
| End bp | 2388485 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641703632 |
|---|
| Product | 50S ribosomal protein L25/general stress protein Ctc |
|---|
| Protein accession | YP_001830789 |
|---|
| Protein GI | 182682629 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
|---|
| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00074587 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATC ATCAAATTAA AGCGCAGCGC CGTAAAGACG AGGGGAAGGG TGCGAGCCGC
CGCCTGCGTC ATGCTGGCAT GATTCCAGCC ATTATTTATG GCGGTGAGCA GCGTCCAGTG
AGTATCCAAC TCAATCATGA GCAGATTTGG CTTGCTCAAC AGAACGAGTG GTTCTATTCC
TCTATTCTCG ATCTGAATGT CGATGGGGCG GGGGCCGAGA AGGTTCTGCT GCGTGATTTA
CAGCGCCATC CTTATCGTCA GTTGGTTATG CATGTTGACT TTCAGCGCGT TAGTTCGGAT
GCCAAGCTGA GTGTTGCTGT GCCGTTGCAT TTCATCAATC AGGCTACTTC ACCTGCCGGC
AAGGTTGGTG GTGTGGTGAT TACCCACGAA TTGAATGAGG TGCAGGTATC GTGTTTACCG
AAAGATTTGC CCGAGTTCAT TGAGGTTGAT TTGTCCACCT TGAATGTCGG TCACGTAATT
CACCTGTCTG ATATTACGTT CCCAATCGGT GTTGAGTTGT CGACTCGGTT GGATAAGGAG
CACGATATGG CCGTAGTCAT TGCTAAGCAT GCAGTGATTG AGGATGACGC TCCTGCAGAA
GAAGGGGAGG GTGACTCCAA GTAA
|
|---|
| Protein sequence | MANHQIKAQR RKDEGKGASR RLRHAGMIPA IIYGGEQRPV SIQLNHEQIW LAQQNEWFYS
SILDLNVDGA GAEKVLLRDL QRHPYRQLVM HVDFQRVSSD AKLSVAVPLH FINQATSPAG
KVGGVVITHE LNEVQVSCLP KDLPEFIEVD LSTLNVGHVI HLSDITFPIG VELSTRLDKE
HDMAVVIAKH AVIEDDAPAE EGEGDSK
|
|---|
| |