| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2040 |
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| Symbol | |
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| ID | 6203387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 2284035 |
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| End bp | 2285780 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641703550 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001830712 |
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| Protein GI | 182682552 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.354299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCAGA ATACAAAAAC GTCTTCTTTG AACACCATGG CAATACGATT CAAACCATAT
ATTCGATGGT GCCTGCTCCC ATTGATCGCA GCGCTGCTCC AACAACAGAG CGCATACGCC
CAAGTCGCAC CACCCGATCA AGAATTGCTC CGCCAACAAG AACGTGAACG CGCACTCCGT
GAACAACTGG AGCGCGGCAC CGATACCCGT TTACAAGAAG TACCGGGAAA AATCCCCTCC
TTATTGCCAC ATGACGAAAC CCCCTGCTTC CCTATCCAGA AAATTTTTCT CGAAGGTGAC
AAAGCCGCCC GCTTTCAATG GGCCTTGACC GCTGCCAACC CACCCCATGA TCCAGCTATC
GGGCGTTGCC TCGGCACCGC AGGCATCAAC ATTGTTATCT CCCGCGTACA AAACGCCATC
ATTTCCCGTG GCTACGTCAC CACACGCGTC CTTGCTACCC CACAAGACCT CAAAAGCGGA
GAACTTCACC TCACCCTCAT TCCCGGCATA CTCGCCCACA TTCGTTTTGC TCCCGGCACC
AAACCCGATG CCACTTTTTG GAACGCCATC CCCGCCCACC CTGGCGACCT ACTCAACCTG
CGCGATATAG AACAAGGTCT AGAGAACTTC AAACGCGTTC CCACAGTCGA AGCGGATATC
CAAATCGTTC CCACCGAAGG AGACAACTCT CAGCCCGGTC AAAGCGATTT ACTTATTTCC
TGGACCCAAG GCCGCCCTGT CCGTTTCAAT GCCAGTTTTG ACGACTCAGG CAGCAAAAGT
ACCGGCAAAA CCCAGGCTGG AGTCACTCTC TCTCTGGACC ATGCCCTGAC TCAAAATGAC
CTCTTCTACA TCAGCCTCAA CCGTTCTGCC TTCAACGGCA GCAAACGCGG GACCCGAGGC
ATCACCCTCC ATTACTCCAT GCCCTTAGGT AACTGGTTAA TCGCCGCCAC CCACAGCGGC
TACAACTACC ACCAAAGCAT TGCAGGCAGC CAACAAACCT ATATTTACAG CGGTGAAAGC
CATAACAGCG AACTCAAACT ATCCCGGCGC CTCATCCGTA CCGCCAGCAG CAAAAGCGGT
ATCTACCTAC GTGGTTGGAC CCGTGACTCG AAAAATTTCA TCGACGATAC AGAAGTCCTC
GTACAACGCC GTCGCATGGC AGGTTGGGAA ATGGGCCTCA CCTATCGCCG CTACATCAAT
ACCGCAACAC TGGATACTAC TCTGGGTTTC CGGCGCGGTA CCGGTGCCTT TGGTGCATTA
CCCGCCCCAG AAGAACTCTT TGATGAAGGC ACCTCCCGTC CCAAAATCTA CTTTGCTGAC
TTACAGTTCA ACCTTCCCTT TCAACTGGGT CACCAATCCT TGCGCTATAC CGGTAGTTGG
CGTGCCCAAT GGAACCGTAC CCCTCTGATT ACCCAAGACC GTTTTTCCAT CGGCGGGCGC
TACACCGTCC GTGGCTTCGA TGGCGAAACT ACCTTGATCG GCGAGCGCGG CTGGCTGTTG
CGTAACGATC TTGGGCTATC CCTTGGAGGC GGCCAAGAAG CGTACCTCGC CCTTGACTAT
GCACACATCG GAGGGGCGTC GGCCTACTTA CAACAAGGCA ACCACCTTGC CGGTACCGCC
TTGGGATTGC GTGGAGGCCA CCGCAGCCTA TTTTGGGATG TCTTCGTAGG CGCCCCAATC
AACCGCCCAC GCACCTTCTC AAACGCCTAT ACCGTGACCG GATTCAGCTT GAACTGGTCC
TTCTAA
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| Protein sequence | MIQNTKTSSL NTMAIRFKPY IRWCLLPLIA ALLQQQSAYA QVAPPDQELL RQQERERALR
EQLERGTDTR LQEVPGKIPS LLPHDETPCF PIQKIFLEGD KAARFQWALT AANPPHDPAI
GRCLGTAGIN IVISRVQNAI ISRGYVTTRV LATPQDLKSG ELHLTLIPGI LAHIRFAPGT
KPDATFWNAI PAHPGDLLNL RDIEQGLENF KRVPTVEADI QIVPTEGDNS QPGQSDLLIS
WTQGRPVRFN ASFDDSGSKS TGKTQAGVTL SLDHALTQND LFYISLNRSA FNGSKRGTRG
ITLHYSMPLG NWLIAATHSG YNYHQSIAGS QQTYIYSGES HNSELKLSRR LIRTASSKSG
IYLRGWTRDS KNFIDDTEVL VQRRRMAGWE MGLTYRRYIN TATLDTTLGF RRGTGAFGAL
PAPEELFDEG TSRPKIYFAD LQFNLPFQLG HQSLRYTGSW RAQWNRTPLI TQDRFSIGGR
YTVRGFDGET TLIGERGWLL RNDLGLSLGG GQEAYLALDY AHIGGASAYL QQGNHLAGTA
LGLRGGHRSL FWDVFVGAPI NRPRTFSNAY TVTGFSLNWS F
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