Gene XfasM23_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_2020 
SymbolthrS 
ID6202154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp2261362 
End bp2263269 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content50% 
IMG OID641703531 
Productthreonyl-tRNA synthetase 
Protein accessionYP_001830693 
Protein GI182682533 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACGA TTACGCTCCC AGACGGCAGT CGCCGTGAAT TTGAAGGTCC CGTTAGCGTT 
ATGCAGGTTG CTCATGCAAT CGGTCCGGGC TTGGCCAAGG CCACCATTGC CGGGCAGATT
GATGGGGGAC ACTTAGTGGA TGCGAGTGAT CTCATTGAGC ATGATGCTAT CCTGCGAATC
ATCACTCCTG AGGATCAAGA AGCCCTGGAG ATTATCCGTC ACTCTTGCGC TCACTTGGTT
GGCCATGCGG TCAAACAGTT GTATCCCGAA GCCAAAATGG TTATTGGTCC AGTGATTGCT
GATGGTTTTT ACTACGATAT TTACTCCAAG CGTCCGTTCA CCCCTGAAGA TTTGGCTGCG
ATTGAGCAGC GTATGGTCGA GTTGATTGCC CAGGACTACG ATGTGGTCAA ACACATCACT
GCACGTCACG ATGTCGTGCG CTTGTTCAAA GAGCGTGGAG AGGATTACAA ACTGCGTCTC
ATCGAAGATA TGGGGCCTGA AGTTACTGCG ATGGGGATTT ATCATCATCA AGAATATGTA
GATATGTGCC GTGGCCCGCA CGTGCCTAAT ACGCGTTTCT TGAAGGCTTT CAGATTGACA
CGCATTTCTG GTGCTTACTG GCGTGGTAAC ACAAAGAATG AGCAGTTGCA GCGCATCTAT
GGCACTGCTT GGGCCGACAA GAAGCAACTT GAAGCCTATA TGCAACGGTT ACAGGATGCT
GAAAAGCGAG ATCACCGCAA GATAGGTAAG GCGCAGGATT TATTCCACCT CCAGGAAGAA
GGGCCAGGTT TGGTGTTCTG GCATCCGAAA GGCTGGGTGA TCTGGCAGAC AATCGAGAAT
TACATCCGTC GTGTCTATCG CAACAGCGGC TATGGTGAAT TGCGTTGCCC GCAAATTTTG
GATGTGTCGT TGTGGCAAAA GTCTGGTCAC TGGGATAATT ACAAAGAGAA CATGTTTTTT
ACTGATTCGG AGAAGCGTAC CTACGCCGTT AAACCTATGA ATTGTCCTGG CCATGTTCAA
GTGTTCAATC AGGGCTTACA TAGCTACCGT GATTTGCCGA TCCGCTATGG CGAATTCGGT
GCTTGCCATC GTAATGAACC ATCCGGTGCG TTACATGGTC TGTTGCGTGT GCGTGGCTTC
ACGCAGGATG ACGGCCACAT ATTCTGTACC GAGGCACAGA TTGAAGCCGA GGTCACGGCA
TTCCACCGTC AAGCGTTGCA GGTCTATGCA GACTTTGGTT TCGAGAATAT TCAGATCAAA
ATTGCCTTGC GTCCAGACAA GCGCCTAGGG GATTCCCTAA GTTGGGACAA AGCGGAGGCT
GCGTTGCGTG CTGCTCTGAG TGCCTGTGAG GTGGAGTGGC AAGAGCTGCC TGGCGAAGGG
GCGTTCTACG GTCCGAAGAT CGAATATCAT CTGAAAGACG CGATTGGCCG CACTTGGCAG
TTGGGCACGA TTCAGGTTGA TTTCATGATG CCAGCTCGTC TCGGCGCAGA GTATGTAGAC
GAGCGCAGCC AGCGCCGTCA CCCGGTCATG TTGCACCGGG CAATCGTGGG TTCGATGGAA
CGTTTCATCG GTATTTTGAT TGAACACTAC GCTGGAATTT GGCCTACTTG GCTTGCGCCT
GTCCAGGTAG TGATCGCTAA TATTACTGAT GCTCAGTATG AATACGCAGA GCAGGTCCAT
AAAGCCCTTT TAAATCAAGG TTTCCGGGTC AACATTGATT TGCGGAATGA GAAAATCGGT
TATAAGATTC GCGAACATAC ACTGCAACGC GTCCCTTACC TTTTGGTGGT TGGTGATCGT
GAAAAGGAGA ATGGCACTGT TGCTGTACGC ACGTGTTCCA GAGAGGATTT GGGTGCTATG
TCGATTTCCA CTTTCGTTGA GCGTTTGCAG ACAGAGCAAG TTGTGTGA
 
Protein sequence
MITITLPDGS RREFEGPVSV MQVAHAIGPG LAKATIAGQI DGGHLVDASD LIEHDAILRI 
ITPEDQEALE IIRHSCAHLV GHAVKQLYPE AKMVIGPVIA DGFYYDIYSK RPFTPEDLAA
IEQRMVELIA QDYDVVKHIT ARHDVVRLFK ERGEDYKLRL IEDMGPEVTA MGIYHHQEYV
DMCRGPHVPN TRFLKAFRLT RISGAYWRGN TKNEQLQRIY GTAWADKKQL EAYMQRLQDA
EKRDHRKIGK AQDLFHLQEE GPGLVFWHPK GWVIWQTIEN YIRRVYRNSG YGELRCPQIL
DVSLWQKSGH WDNYKENMFF TDSEKRTYAV KPMNCPGHVQ VFNQGLHSYR DLPIRYGEFG
ACHRNEPSGA LHGLLRVRGF TQDDGHIFCT EAQIEAEVTA FHRQALQVYA DFGFENIQIK
IALRPDKRLG DSLSWDKAEA ALRAALSACE VEWQELPGEG AFYGPKIEYH LKDAIGRTWQ
LGTIQVDFMM PARLGAEYVD ERSQRRHPVM LHRAIVGSME RFIGILIEHY AGIWPTWLAP
VQVVIANITD AQYEYAEQVH KALLNQGFRV NIDLRNEKIG YKIREHTLQR VPYLLVVGDR
EKENGTVAVR TCSREDLGAM SISTFVERLQ TEQVV