Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1967 |
Symbol | ddl |
ID | 6203321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 2206522 |
End bp | 2207484 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641703476 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_001830640 |
Protein GI | 182682480 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000254256 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTATGA GCATATTTTC ACTGTCTCCA CGGTATACGG ATCCGGCGGT GTTTGGTCGT GTTGCAGTGT TATTAGGGGG GACGTCTGCT GAGCGTGAGG TGTCTTTGCT TTCAGGTCGT AATGTGTTGG AAGTATTGCG CATGCGCGGT GTTGATGCTC AGTCGGTAGA TGGGGTTCCG GCACTCGCTC AGGCGCTGGT GGAACGGCGT TTTGATCGTG TGTTCAATGT GTTGCACGGT CATAATGGCG GTGGTGAGGA TGGTGTGGTG CAGGGGTTGA TGCAGGCTTT TGGTGTGCCG TATACAGGTT CGGATGTGCT TGGTTCAGCG TTGAGTATGG ATAAGGTGCG CACTAAACAG GTTTGGCTTG CGCTGGGTTT GCCGACGCCG CGTTATGCGA GTTTGAGTGT GTGTGCCACT GCTGTTGAGG TGCGTAAGGC GGTTGAGATG CTAGGTTTTC CGGTGATTAT TAAGCCGGCT AAAGAAGGGT CTAGTGTTGG TGTCAGTCGT GTGTTTGCAC TGGAGCATTT GGAGGAGGCG GTTGCTTTAG CGGCGCGTTA CGAGGGTGAG TTGCTGATGG AGCAGTTGAT CGAAGGGGAT GAATTGACGG TGTCGATTCT TGATGAAATG GCGTTGCCCT CAATTCGGAT CGTTCCTCAG GGGCAGTGGT ATGACTATAA CGCGAAGTAT CTTGCTGAAG ACACGCAGTA TGTGTGCCCG GGTTTGGATG ATGTTGCTGA GGCTGAAATC GCTCAACTTG CGTTGGCTGC ATTCCATAGT GTTGGTTGTC GTGGTTGGGG TCGTGTGGAT GTGATGCGCG AGCGCGGCAG TGGGCGCTTT TTCTTATTGG AAGTCAATAC TGCTCCTGGA ATGACGACTC ACTCGTTAGT GCCAAAGGCA GCGAGTCAGT TGGGTATGGG TTTTGATGAT TTGGTGTGGC GGATTCTGGA GCAGACTTTA TGA
|
Protein sequence | MGMSIFSLSP RYTDPAVFGR VAVLLGGTSA EREVSLLSGR NVLEVLRMRG VDAQSVDGVP ALAQALVERR FDRVFNVLHG HNGGGEDGVV QGLMQAFGVP YTGSDVLGSA LSMDKVRTKQ VWLALGLPTP RYASLSVCAT AVEVRKAVEM LGFPVIIKPA KEGSSVGVSR VFALEHLEEA VALAARYEGE LLMEQLIEGD ELTVSILDEM ALPSIRIVPQ GQWYDYNAKY LAEDTQYVCP GLDDVAEAEI AQLALAAFHS VGCRGWGRVD VMRERGSGRF FLLEVNTAPG MTTHSLVPKA ASQLGMGFDD LVWRILEQTL
|
| |