| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1911 |
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| Symbol | |
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| ID | 6203234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 2128479 |
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| End bp | 2130290 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641703420 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001830585 |
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| Protein GI | 182682425 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00687521 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTGA TTGAAATCAA AGTTCCCGAT ATCGGCGATT ACAGCAAGGT CCCAGTCATC
GAAGTGCTGG TTACCGTTGG CGACCACTTG GTCAAAAACC AAGGGATCCT CACACTAGAA
TCAGACAAAG CCACCTTGGA AGTGCCATCG ATGAATAATG GCATTGTCAA AGAACTGAAA
GTCAACGTCG GCGATTTGCT TTCACAAGGC GACGTGATCC TCCTGCTGGA GACCGAAGAC
ACCACCGCCC CCCCCTCACC AAGCAACGCG GCGACATCCG ACACCACCTC ACCGCCCCCG
CCATCCCCCC AACCAGCCGC TTCCAAGCCG ACAGCACCCG ATCAACAACA CTCCGACATC
AAGTGCCGCA TGGTCGTACT CGGTGCCGGT CCCGGCGGCT ACACCGCAGC ATTCCGCGCC
GCTGACCTCG GCTTGGATAC AGTGCTCGTT GAACGCTATC CCAACCTAGG TGGCGTCTGC
CTCAATGTCG GCTGCATTCC TTCCAAAGCA TTACTGCACG CAGCCGCCGT CATCGACGAA
GCTGCACATG CCAGCACCTT TGGAATTGAT TTTGGCAAAC CCAAAATCAC CCTAGACACA
CTGCGCGAAT ACAAACAAAA CGTAGTCAAC AAACTGACTG CCGGCTTGGC CGGGATGGCC
AAACAACGCA AGGTACGCAC CGTCACCGGC ATCGCGCACT TCGTCTCTCC CAACACACTG
GACATTACCG CTGCTGACGG CAGCACCCAA CGACTCCATT TCCAACAATG CATCATTGCT
ACCGGCTCAC ACCCAGTGAA GCTACCAAAC TTCCCTTGGG ACGACCCGCG CATCATGGAC
TCCACTGACG CACTGGAACT GGCCGAAGTG CCAAAAAAAC TGCTTGTCGT TGGTGGCGGC
ATCATCGGCC TAGAAATGGC TACCGTGTAC AACGCCCTGG GCAGCCACGT CACCATTGTC
GAATTCATGG ACCAGATCAT CCCCGGCACC GACAAAGATC TAGTGAAGCC ACTGGCGGAC
CGCATGAAAA AACAGGGCAT TGAAATACAC CTGAACACCA AAGCAAGCCA CGTCAAAGCC
GACAAAAAAG GCATCACCGT CTCATTCGAA GCACCCACCC AAGGCACACA ACCCGCATTA
AAAACATCGA CCTATGATCG CGTCCTTGTT GCCGTCGGCC GTACACCGAC AGGCAACAAC
ATCGGCGCTG AAAAAGCAGG CGTCAACGTC ACCGAACGCG GCTTCATCCC GGTTGATCGC
CAAATGCGCA GCAACGTACC CCATATCTTT GCCATTGGAG ACATTGTTGG TAACCCAATG
CTGGCGCACA AAGCCACACA TGAAGGCAAA CTGGCCGCCG AAGTCGCCGC TGCTGAAACA
GAATCAGGCA AACATCGGGA ATGGGTTGCC CGCGTGATCC CATCCGTGGC CTACACCAAC
CCGGAAATTG CCTGGATCGG TATCACTGAA ACCGAAGCCA AAGCGAAAGG ACTCAACATC
GGCGTCGCCA AATTCCCCTG GGTTGCCAGC GGTCGCGCCA TAGGCATCGG ACGCACTGAA
GGCTTCACTA AACTCATCTT CGACGAAGAC ACACACCGCA TCATTGGCGG AGCGATCGTC
GGCGTCCACG CAGGCGACCT CTTGGCTGAA ATCGGACTCG CCATCGAAAT GGGTGCCGAA
GCCGAAGACA TCAGCCACAC AATCCACGCA CACCCCACAC TGAGCGAATC GATTGCCATG
AGCGCCGAAG TCTACGACGG CACCATCACC GACTTGTATC TCCCCAAAAA ATCCGCTACT
TCAGCAAAGT AA
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| Protein sequence | MTVIEIKVPD IGDYSKVPVI EVLVTVGDHL VKNQGILTLE SDKATLEVPS MNNGIVKELK
VNVGDLLSQG DVILLLETED TTAPPSPSNA ATSDTTSPPP PSPQPAASKP TAPDQQHSDI
KCRMVVLGAG PGGYTAAFRA ADLGLDTVLV ERYPNLGGVC LNVGCIPSKA LLHAAAVIDE
AAHASTFGID FGKPKITLDT LREYKQNVVN KLTAGLAGMA KQRKVRTVTG IAHFVSPNTL
DITAADGSTQ RLHFQQCIIA TGSHPVKLPN FPWDDPRIMD STDALELAEV PKKLLVVGGG
IIGLEMATVY NALGSHVTIV EFMDQIIPGT DKDLVKPLAD RMKKQGIEIH LNTKASHVKA
DKKGITVSFE APTQGTQPAL KTSTYDRVLV AVGRTPTGNN IGAEKAGVNV TERGFIPVDR
QMRSNVPHIF AIGDIVGNPM LAHKATHEGK LAAEVAAAET ESGKHREWVA RVIPSVAYTN
PEIAWIGITE TEAKAKGLNI GVAKFPWVAS GRAIGIGRTE GFTKLIFDED THRIIGGAIV
GVHAGDLLAE IGLAIEMGAE AEDISHTIHA HPTLSESIAM SAEVYDGTIT DLYLPKKSAT
SAK
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