Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1909 |
Symbol | |
ID | 6202643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 2125224 |
End bp | 2125880 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641703418 |
Product | OmpW family protein |
Protein accession | YP_001830583 |
Protein GI | 182682423 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000171006 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTAAAA TTTCACTGAT TGGCCTAGCT ACTATGAGTA TGCTGGCCTT TAACACCTCA GCCTTTGCGT TGGGCACGGC TTCTTCCAAC AGTGGTGCCT CCGGCAAGCA TTGGTCAGTG GTTGGCGGCG CTGCCCTCGT GCAACCAAAG AATGGGAAAA ATGCAGCACA GAATACTGTC AAGTTTGGTG GCGATGTTGC ACCAACGCTT AGTGTCACCT ACTACATCAA CGATAATGTG GGATTCGAGC TGTGGGGTAT TACTAAAAAG TTGAGTTATA CCGCAAAGAC TGACGCATCG GGCAAGATCG GCAATGTGAC TCAAAAGACA CCGTTAGCGT TGAGTGCGCA GTATCACTTT GGTCAGGCGC AAAACGTGTT CCGTCCGTTT GTTGGTGTTG GTTATTCTCA AGCTAAGTCT AGATTTACTG CTCTGGGATC TACCGATCGT GTGAATCTAG GCAATTTCCG CGGTGCAATC GGCACGATTG GTTTAGATAT GAATGTTGAT TCAAATTGGT TTGCTCGTCT TGATGCGCGT TATACGCGTT TCAGTAATAG CAATAGCAAG GCGGCTCTTT CTTCAAGTTT GGGTCTCGAT CAGAATCGGA GACTGGATCC GTGGTCCGTG GGTTTCGGCA TCGGCGCGCG TTTCTGA
|
Protein sequence | MRKISLIGLA TMSMLAFNTS AFALGTASSN SGASGKHWSV VGGAALVQPK NGKNAAQNTV KFGGDVAPTL SVTYYINDNV GFELWGITKK LSYTAKTDAS GKIGNVTQKT PLALSAQYHF GQAQNVFRPF VGVGYSQAKS RFTALGSTDR VNLGNFRGAI GTIGLDMNVD SNWFARLDAR YTRFSNSNSK AALSSSLGLD QNRRLDPWSV GFGIGARF
|
| |