Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1899 |
Symbol | |
ID | 6203208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 2112562 |
End bp | 2114940 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641703408 |
Product | penicillin-binding protein 1B |
Protein accession | YP_001830573 |
Protein GI | 182682413 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGGCC ATTCCCCCTG GTGGGGCTGG CTGATCGCTT GTGGCTTGGC AGGCTTGGCG CTTGCCATGG GCTTTCTGAT CCCTTACACG CTTTACCTGA ATCAGCAGGT GACCGCTCGC TTTGGTGAGC TGCGCTGGCA GATCCCAACC CGGGTCTATG CTCGCCCTTT GATGCTACAA CCGGGGATGG CATTAGATGC GCGCACGTTG AAGATCGAAC TGGATGCTGC ATCCTATCGT GAGGACAATC ACGGCGAGTT ACCAGGCACT TACCAACAAC AAAATGGCCG ATTCACTGTC TCCAGCCGTG GCTACGTTGA TGTGGATGGT GCAATACCAG CAAGCCGTCT GATCATCACG CTGAACAACA ACCAAGTGTC TGCACTGCGG AATGCAGATA CACGTAAACC AATCAGGCGC GGGCGACTGG ATCCAGCACG GATCGCCACA CTGTACGGCC AGAAGCAGGA AGAACGCCGT TTGGTCAGGT TGGAGGAAGT TCCCCAACTG CTCGTCACCG GCTTACAAGT GGTGGAAGAC CGCGATTTCA AACATCACCA CGGCATCGAC ATCACCAGCA TTTTGCGCGC AGCCTGGGTG ATGGTGCGTT CAGGCGGTGG CGTTCGCCAA GGTGCCAGTA CCCTAACGCA ACAGCTGGCG CGTAGCGGAC TGCTTGGTAT CGGCAAAGAA CAGACGTTGC AGCGCAAATG CAACGAAATC CTGTATGCAC TGATCCTGGA GGCACGCTAC TCCAAGCGCG TTATCCTGGA GTCCTATCTC AATCAAGTCT ACCTGGGTCA ACGTGGCAGT CAGGCCGTAC ATGGTGTCGC AACTGGCGCG GAGTTCTGGT ATGGACGTGA GCTAGGCTCG CTCACTACTG AGCAGGTCGC CCTGCTCATC GGACTGGTCA AAGGACCTTC GTACTACGAT CCACGCCGTT TCCCTGATCG CGCATTGTCC CGACGCAATT TCGTGCTTGG CAAACTGCAT GAAAACAAAC TGATCGACGA TGCTGAATAC ATGCGCGCCC AAGCATCGCC CCTAGGTGTC CCCAAAGAAC CTGGCCTGGT TGCAGCCAAC CGCTTCGTCG CGTACCTGGA CCTGGTACGC CGCCAGCTTG CTCACGATTA CCCAGAGAAT GTGTTGCGTG GCGCAGGCAT GACCGTACTT ACCGGCATGT CGCCCTCAGC ACAAGCCTAT GCTGAGAGAG GAGTAAAAAC CACGCTCAGT GCACTGGAAA AGGTCAAGGG GCTGAAACGT CCGCCACTGC AAGCCGGACT GGTACTGACG GACGTGCATA ACGGCGATGT CCTGGCCGTG GTCGGTAGTC GCGATGCAAC CCAATCGGGT TTCAATCGTG CCATTGAAGC GCAACGCCAG GTGGGTTCGC TGCTGAAACC GTTCGTCTAT CTACTAGCAC TGGCCTCACC GGATCGTTGG TCCTTGTCCA GTTGGGTAGA AGACACCCCG GTCAACATAC CGCTGGCACA TGGGCGCATT TGGTCGCCAA GCAACTCAGA CAACATCAGC CACGGAACCG TGCGCTTGAT TGATGCATTG GCACACTCTT ACAACCAAGC AACAGTGCGC GTTGGCATGC AGGTCGGCCC AGAACGTGTG GCTCAATTGA TTAACGTTCT GGCCGGATTA AAAGCCGACG CCAACCCATC GCTGATCCTG GGCGCAACCG ACCAAAGCCC TTATGCAATG ACGCAGCTCT ATCAGTTCCT GGCTTCTGGG GGTGAAATCC AACCATTGCA CGCAGTGCGT GGCGTACTCG ATCCGCAAAA CAAACTGCTC AAACGCTATG ACAATACCCC GGCACCTGCA CAGCCCGGTG ATTCAGTCGC AGCCAACGTC ATCAGTGTTG CGCTACAGGA AGTGGTCAAC AGCGGTACCG CGCGGCAACT CATCATTGAT GGCTTGGGTC GGCTGTCCCC TGCCGGCAAA ACCGGAACCT CCAACGATGG ACGTGACAGC TGGTACGCGG GCTATACCGG GAACCACTTG GCTGTCATTT GGGTCGGCAA CGACCAAAAC GAGCAAACTG GCCTATACGG CGCCACCGGT GCCATGCGCG TCTGGTCGAG CATCTTCTCG CAGTTACCAA GCACCAGATT ACAAGTCAAC GGCAAAGGAC TGGATTGGCA ATCAGTCGAG CCTATGGGCA CTGGCACCAC AGACGCAAAC TGCCCAGGCG CACGCCGCTT TCCGTTTGTA ACCGGCTTCG CTCCGCCTTA TACAGCATGC TCTGGTGCTG GCGGAGCACC CGAAGCCGGG CATAATATCG GCTGGCGTAA CTGGTTCGGG CTGGATAAGC AGAAGGGGGA CCAAGCATCG CCCCCCATAA CGCCTCCTCC CGATCAATCG ACACAATGA
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Protein sequence | MPGHSPWWGW LIACGLAGLA LAMGFLIPYT LYLNQQVTAR FGELRWQIPT RVYARPLMLQ PGMALDARTL KIELDAASYR EDNHGELPGT YQQQNGRFTV SSRGYVDVDG AIPASRLIIT LNNNQVSALR NADTRKPIRR GRLDPARIAT LYGQKQEERR LVRLEEVPQL LVTGLQVVED RDFKHHHGID ITSILRAAWV MVRSGGGVRQ GASTLTQQLA RSGLLGIGKE QTLQRKCNEI LYALILEARY SKRVILESYL NQVYLGQRGS QAVHGVATGA EFWYGRELGS LTTEQVALLI GLVKGPSYYD PRRFPDRALS RRNFVLGKLH ENKLIDDAEY MRAQASPLGV PKEPGLVAAN RFVAYLDLVR RQLAHDYPEN VLRGAGMTVL TGMSPSAQAY AERGVKTTLS ALEKVKGLKR PPLQAGLVLT DVHNGDVLAV VGSRDATQSG FNRAIEAQRQ VGSLLKPFVY LLALASPDRW SLSSWVEDTP VNIPLAHGRI WSPSNSDNIS HGTVRLIDAL AHSYNQATVR VGMQVGPERV AQLINVLAGL KADANPSLIL GATDQSPYAM TQLYQFLASG GEIQPLHAVR GVLDPQNKLL KRYDNTPAPA QPGDSVAANV ISVALQEVVN SGTARQLIID GLGRLSPAGK TGTSNDGRDS WYAGYTGNHL AVIWVGNDQN EQTGLYGATG AMRVWSSIFS QLPSTRLQVN GKGLDWQSVE PMGTGTTDAN CPGARRFPFV TGFAPPYTAC SGAGGAPEAG HNIGWRNWFG LDKQKGDQAS PPITPPPDQS TQ
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