| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1869 |
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| Symbol | |
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| ID | 6203153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 2074117 |
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| End bp | 2076564 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641703378 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001830543 |
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| Protein GI | 182682383 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAAC ACCTTCTTAT CGTCGAATCG CCCGCCAAGG CCAAGACGAT CAATAAATAT
CTCGGCAAAG ATTTCACAGT CTTAGCCTCT TACGGGCATG TACGCGATTT GGTACCGAAG
GAAGGCGCAG TCGATCCAGA AAACGGCTTT GCGATGCGCT ACGACCTCAT CGACAAGAAC
GAAAAGCACG TCGAAGCAAT CACAAAAGCG GCCAAAACAG CCGACAGCAT CTATCTAGCA
ACCGACCCTG ATCGCGAAGG CGAAGCGATC AGCTGGCACA TCTCCGAGAT CCTTAAAGAA
CGTGGATTAT TGAAGGACAA ACCGATGCAA CGCATCGTGT TCACCGAGAT CACACCACGC
GCAATTAAAG AAGCAATTCA AAAGCCGCGG ATGATTGCCA GCGACCTGGT AGACGCCCAA
CAAGCACGCC GTGCGCTGGA TTACTTGGTT GGCTTCAACC TCTCACCAGT GCTGTGGCGC
AAAGTACAAC GCGGTTTATC GGCAGGGCGT GTGCAATCGC CAGCACTGCG CATGATTGTC
GAGCGTGAAG AGGAAATTGA GGCATTCATC ACGCGTGAAT ACTGGAGCAT CCATGCCGAG
TGTACCCATC CCGCCCAACA CTTCAGCGCC AAACTCATCA AACTGGATGG GAAAAAATTC
GAGCAATTCA CTATTACCGA TAGCGACACT GCCGCAGCCG CACAACGCAG GATCCAGCAG
GCCGCACAGG GACGCCTGCA CATCACTGAC GTTACCAACA AAGAACGGAA ACGACGCCCT
GCACCGCCCT TCATCACATC CACATTACAG CAAGAAGCCT CACGCAAACT GGGTTTCACT
ACACGTAAAA CGATGCAGAT TGCGCAAAAA CTTTACGAGG GGATCGCACT GGGTGAGGAA
GGCAGCGTCG GCCTGATTAC GTATATGCGT ACCGACTCAG TCAACCTGTC GCTGGATGCT
CTATCGGAGA TCCGCGACAT CATCGCACGC GACTACGGTA CCAATGCACT TCCAGACAAA
CCTAACGTCT ACACCACCAA ATCCAAAAAC GCACAAGAAG CACACGAAGC AGTACGCCCG
ACTTCAGCAC TACGCACCCC GACACAGGTC GCACCGTATC TTTCCAACGA AGAACACCGG
CTATACGAAC TGGTGTGGAA ACGTACAGTA GCCTCCCAAA TGATCCCAGC CATACTCAAT
ACCACCAGTG TCGATCTAGC CGCCGGCAAC GAACACGTAT TCCGTGCCAC CGGAACCACC
GTCGTAGTAC AAGGTTTCCT AGCTGTGTAC GAAGAAGGCA AGGACAACAA GAACGCCGAA
GACGATGACG AAGGCCGCAA ACTCCCCGTA ATGAAAACAG GGGAAAATGT TCCGCTAGAA
CGTATCCTGA CCGAACAACA CTTTACACAG CCACCACCAC GCTACACCGA AGCAGCGTTG
GTCAAAGCTC TGGAAGAATA CGGCATCGGT CGCCCATCGA CTTACGCCTC CATCATCCAA
ACCCTACTAT TTCGCAAATA CGTAGATATG GAAGGTCGCA GCTTCCGCCC AACGGACATT
GGCCGCGCCG TATCCAAATT TCTCTCCAGC CACTTCACCC AGTACGTGGA CTACGACTTC
ACCGCACACC TGGAAGATGA ATTGGATGCG ATCTCACGTG GGGAGGAAGA ATGGATTCCA
CTGATGAAAA AGTTTTGGGT CCCCTTCAAA GAATTGGTTG AAGATAAGAA AGATTCCCTA
GATAAAACCG ACGCTGGCAG CGTGCGCCTG CTCGGCATTG ACCCCACCAG CGGCAAAGAA
GTCAGCGCAC GCATTGGCCG CTTCGGACCG ATGGTGCAAA TCGGCACCGT TGATGATGAA
GAAAAACCAA GATTTGCCTC ATTACGCCCC AACCAAAGCA TCTACTCAAT CAGCCTCGAA
GAAGCCATCG AACTGTTCAA AATGCCACGC GTGCTTGGAG AAGACCAAAG CCAACAGGTC
AGCGTCGGCA TCGGCCGCTT TGGACCGTTT GCCAAACGTG GCAGCACTTA TGTTTCACTG
AAAAGCGAAG ACGATCCCTA CACGATTGAC TTGGCGCGCG CGACCCTTCT CATCAACGAG
AAAGAAGAAA TCGCACGTAA TCGAATCATC AAAGACTTCG AAAACAGCCA GATCCAAGTA
CTGAACGGAC GCTTCGGTCC CTACATCAGC GATGGCAAAC TTAACGGGAA GATCCCCAAG
GATCGCGAAC CAGCCTCGCT GACTCTCGAA GAAGCACAGC AATTACTGAT AAACACTGGG
AAACCGGCAC GCAAAAACTT CAGTACGAAA AAAACTGCAA CCAAGAACGA GACGCGCAAA
CAAACCACAA AAAAACGCAC TACGGACGCA AAGGCAACCA AAAAAGTGTC AGATAAGCCC
GTAAAGAAAC AAATCAAAAA ACGCATCGCC CCCAACATTA CCCAATAA
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| Protein sequence | MPKHLLIVES PAKAKTINKY LGKDFTVLAS YGHVRDLVPK EGAVDPENGF AMRYDLIDKN
EKHVEAITKA AKTADSIYLA TDPDREGEAI SWHISEILKE RGLLKDKPMQ RIVFTEITPR
AIKEAIQKPR MIASDLVDAQ QARRALDYLV GFNLSPVLWR KVQRGLSAGR VQSPALRMIV
EREEEIEAFI TREYWSIHAE CTHPAQHFSA KLIKLDGKKF EQFTITDSDT AAAAQRRIQQ
AAQGRLHITD VTNKERKRRP APPFITSTLQ QEASRKLGFT TRKTMQIAQK LYEGIALGEE
GSVGLITYMR TDSVNLSLDA LSEIRDIIAR DYGTNALPDK PNVYTTKSKN AQEAHEAVRP
TSALRTPTQV APYLSNEEHR LYELVWKRTV ASQMIPAILN TTSVDLAAGN EHVFRATGTT
VVVQGFLAVY EEGKDNKNAE DDDEGRKLPV MKTGENVPLE RILTEQHFTQ PPPRYTEAAL
VKALEEYGIG RPSTYASIIQ TLLFRKYVDM EGRSFRPTDI GRAVSKFLSS HFTQYVDYDF
TAHLEDELDA ISRGEEEWIP LMKKFWVPFK ELVEDKKDSL DKTDAGSVRL LGIDPTSGKE
VSARIGRFGP MVQIGTVDDE EKPRFASLRP NQSIYSISLE EAIELFKMPR VLGEDQSQQV
SVGIGRFGPF AKRGSTYVSL KSEDDPYTID LARATLLINE KEEIARNRII KDFENSQIQV
LNGRFGPYIS DGKLNGKIPK DREPASLTLE EAQQLLINTG KPARKNFSTK KTATKNETRK
QTTKKRTTDA KATKKVSDKP VKKQIKKRIA PNITQ
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