Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1856 |
Symbol | |
ID | 6203115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 2059834 |
End bp | 2060817 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641703365 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001830530 |
Protein GI | 182682370 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGATG ACCTCGCTGG ATTCTCCCGT CAGACCACTG TGCCGGATGG TGCTGCTGGC CGTCGTTTCG ATGCTGTGTT GGCTGAGCTT TTTCCGGAAT TCTCGCGCTC GCGCTTGACG GAATGGATCA AATCTGGGGA TGTGCTGTTG AATGGAGTGT TGGTACGACC GCGTGATCCG GTTTACGGTG GCGAGGTGGT TTGGTTGCAG GTCATGCCAG ATATCCGCAC TGATGCGGTG CCGCAGGATA TTCCGTTAGA TATTTTGTAC GAGGATGAGC ATGTATTCGT CATCAATAAG CCTGCGGGGT TGGTCGTACA CCCGGGGGCT GGTAATCCCG ATGGGACGTT GGTTAATGCG TTGCTGCATC GTGATCCGGC GTTAGCGGCG GTGCCGCGTG CTGGGGTGGT GCATCGTTTG GACAAGGATA CGAGTGGGGT GATGGTCGTG GCACGCACGC TGCAGGCGCA GACTGCGTTG GTGGAGCAGT TGTCTTCACG TCAGGTACAT CGTCAGTATT TGGCAGTCGT TGTTAGCGCG TTGGTTTCCG GTGGTACGGT GAATGCGGCG ATTGAACGTC ACCCGCGTGA CCGGCTGCGG ATGGAGGTGT CAGACACAGG GAAGGAGGCA GTCACTCATT ATCGGTTGCG GGAACGTTTC CGTGCGCATA CGGCATTGGA GTGTCGTTTA GATACTGGGC GTACGCATCA GATCCGTGTC CACATGGCGC ATCTGCGCCA TCCAATTGTC GGTGATCGGT TGTACGGTGG GTCGTTGAAG TTGCCAAAGG GCGGCACGGA TGCCTTGGTG GCCATGCTGC GTGGATTCAA GCGTCAGGCA TTGCATGCTG AGGTGTTGGA GTTTCTGCAT CCTGTAAGGG CTCTGCCTGT GCGTATTGTT GCGCCGGTGC CAGAGGATTT ATGTCAGCTT CTTGCGGCGC TGCGTGAGGA CAGTGCGCTG TTCTTTGAGC GGGAGTGGCG TTGA
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Protein sequence | MSDDLAGFSR QTTVPDGAAG RRFDAVLAEL FPEFSRSRLT EWIKSGDVLL NGVLVRPRDP VYGGEVVWLQ VMPDIRTDAV PQDIPLDILY EDEHVFVINK PAGLVVHPGA GNPDGTLVNA LLHRDPALAA VPRAGVVHRL DKDTSGVMVV ARTLQAQTAL VEQLSSRQVH RQYLAVVVSA LVSGGTVNAA IERHPRDRLR MEVSDTGKEA VTHYRLRERF RAHTALECRL DTGRTHQIRV HMAHLRHPIV GDRLYGGSLK LPKGGTDALV AMLRGFKRQA LHAEVLEFLH PVRALPVRIV APVPEDLCQL LAALREDSAL FFEREWR
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