| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1848 |
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| Symbol | |
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| ID | 6202780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 2049424 |
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| End bp | 2050518 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641703358 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001830523 |
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| Protein GI | 182682363 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAT TTTCCGCGGA TGATCACCGT CACATGGAAC GGGCCTTGTG TTTGGCTGAG
CGTGGTGCTT ACACGACGCG TCCTAACCCA ATGGTGGGTT GTGTGATTGT GCGTGATGGT
GAAGTAGTGG GAGAGGGTTG GCACCAGCGT GCTGGCGATC CGCATGCTGA GGTATTTGCA
TTGTGTGCGG CTGGAGACCG CGCACGAGGT GCAACGGCTT ACGTCACGTT GGAGCCGTGT
GCGCACTCGG GGCGTACTCC GCCGTGTGCG ATGGCGTTGA TTGATGCCGG AGTGAGACGG
GTGGTGGCGG CGATGGTCGA TCCATTTCCG TTAGTCAATG GTGGGGGAGT CACTCTGTTA
CGTGCGGCTG GGGTGACGGT TGAGCATGGT TTGATGGAGG CGCAGGCGCG CGCACTCAAC
CGTGGCTTTC TGTCGCGGGT GGAGCGTGGT CGGCCATGGG TGCGGATCAA GCTTGGTAGC
AGTTTGGATG GGCGTACCGC GTTGGCTAGT GGCGAATCCA AGTGGATTAC CGGGGAGGCG
GCACGTGCTG ATGTGCAGCG TTGGCGCGCG CGCGCTAGCG CGATTTTGAC GGGGGCTGGG
ACGGTGCTTG CCGATGATCC GGCGTTAACG GTGCGCCTGG GTGGGGAGGA GGGAGCGTTT
TTGCCGCCGT TGCGGGTGGT GCTTGATTCT AGCTTGCGTT CACTTAGTTG CGTGAAGGTG
CGTGACGGTA CTGCACCAAC GTTGTATCTG CATGGTTTTG GGGTCACGTC CCCTGTGTTG
CAACACGTCG ATTTTTCCGA GGTTCAGCAA CGTGATGCTG GGCTTGATCT GGAGGCTGTG
TTACGCCTGT TGGGTGAGCG TGGCATCAAT GAGGTGCAGG TTGAGGCTGG GGCGACGTTA
TGCGGGGCCT TGCTGCACGC TGGGTTGGTG GATGAGTTGC TGATTTATAT TGCACCGTTG
TTGCTGGGTG ATACGGCACG GCCATTACTG GCTGGATTGG ATATCGGGCG CATGGATCAG
TGCATTGGTT TGAAGGTGCT GGAGGTCGCT CAGGTCGGCA ATGATCTGCG ATTGTTATTA
CGTCCGTGTG GTTGA
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| Protein sequence | MSAFSADDHR HMERALCLAE RGAYTTRPNP MVGCVIVRDG EVVGEGWHQR AGDPHAEVFA
LCAAGDRARG ATAYVTLEPC AHSGRTPPCA MALIDAGVRR VVAAMVDPFP LVNGGGVTLL
RAAGVTVEHG LMEAQARALN RGFLSRVERG RPWVRIKLGS SLDGRTALAS GESKWITGEA
ARADVQRWRA RASAILTGAG TVLADDPALT VRLGGEEGAF LPPLRVVLDS SLRSLSCVKV
RDGTAPTLYL HGFGVTSPVL QHVDFSEVQQ RDAGLDLEAV LRLLGERGIN EVQVEAGATL
CGALLHAGLV DELLIYIAPL LLGDTARPLL AGLDIGRMDQ CIGLKVLEVA QVGNDLRLLL
RPCG
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