Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1833 |
Symbol | |
ID | 6202596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 2036418 |
End bp | 2038427 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641703344 |
Product | excinuclease ABC subunit B |
Protein accession | YP_001830509 |
Protein GI | 182682349 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGGTT TGTTTCAGCT TGTTTCTTCA TACTCTCCTT CTGGGGATCA GCCTGCGGCT GTACAGAAGC TAGTCACTAA TTTCCATGCT GGCATTGCTA AGCAGGTGTT GCTTGGCGTT ACTGGTTCTG GGAAGACTTA CACCATCGCT AATGTGGTTG AGCAGATTCA GAAGCCAACT CTGGTGATGG CGCCAAACAA GACGTTGGCA GCACAGCTTT ACGGGGAATT CAAGGCGTTC TTCCCGCACA ATGCGGTGGA ATATTTTGTC AGCTACTATG ACTACTATCA GCCTGAGGCG TATGTTCCAG CCTCGGACAC GTTCATTGAA AAGGACAGTT CTATCAATGA ATACATTGAA CAGATGCGTT TGGCTGCAAC GAAGGCTTTG CTGTCACGTT CTGATGTGTT GGTGGTGGCG ACCGTGTCGG CGATTTATGG TTTGGGTGCG CCTGAGGATT ATCTTTCGTT ACGTTTGATT TTGTCGCTGG GTGAGCATAT TGAGCAGCGG CAATTGATCA GGCATCTCAC TGAGTTGCAG TACACTCGTA ACGAGTTGGA TTTGGTGCGT GGTAGTTTCC GTGTACGTGG TGAGGTTGTT GATGTATTCC CGGCTGAGTC AGAGATGGAG GCGCTGCGCA TTGAGTTGTT TGATGGTGAG ATAGAAAGTT TGAGCTTGTT CGATCCGCTT ACCGGTCAGA CGGTACGTAA GTTGCAACGT TTTAGTGTTT ACCCTAAAAC CCACTATGCA ACTACGCGTG AACGTACGCT CAGTGCCGTT GATACGATCA AGGATGAGCT GAAAGAGTAT CTAGAACTTC TGTATGGGCG GAATAAGTTG GTTGAGGCGC AACGTTTAGC TCAGCGTACT CAGTTCGACT TAGAGATGAT GGCCGAGGTT GGTTATTGCA ATGGTATTGA AAATTACTCT CGTCACTTAA CTGGTAAGGC TCCGGGGGAA CCTCCACCGA CGTTGTTCGA TTATCTTCCT CCGGATGCGC TACTGGTCAT TGATGAGTCG CATGTGACAA TTCCGCAGAT CGGTGCGATG TTCAAGGGGG ACCGTTCCCG TAAAGAAACG CTGGTGGAAT TTGGTTTCCG TTTACCATCG GCGTTAGACA ATCGACCGCT TCGCTTTGAG GAATGGGAAG TGCGTTCGCC GCGTAGCATT TACGTCTCGG CGACTCCAGG ATCATATGAG TTCCGCGAGT CCGCGGGTGA AGTCATAGAG TTGCTGGTGC GTCCGACCGG CTTGATTGAT CCTGAGATAG AAATCCGTCC GGTTGCGACG CAGGTGGATG ATCTGATTTC CCAGATCAAT GCGTGTATCA AGTTAGGTGA TCGGGTTTTG GTCACCACGT TAACTAAGCG TATGGCTGAG AACCTCACTG AATATTTGAG CGAGCAGGGT ATCCGGATAC GTTATTTGCA TTCGGAAATC GATACGGTAG AACGTGTGGA GATCATCCGT GATTTGCGTC TTGGTAAATT CGATGTGCTG GTTGGTATCA ACCTTCTACG TGAGGGATTG GATATGCCGG AGGTGTCGTT GGTGGCCATT CTTGACGCTG ATAAAGAGGG GTTTTTGCGT TCGACCAGTT CACTGATTCA GACGATTGGT CGTGCCGCAC GCAGTGTGCG CGGTAGGGCA ATCTTGTATG CCGATAAAGT GACTCGTTCA ATGCGCGCTG CAATTGATGA AACCGAGCGA CGTCGACAAA AGCAGAAGGA ATACAATGCT GAGAACGGTA TTGTTCCGAA ATCCGTTGTA CGGCCCATTA GCGACATTTT GGAGGGTGCG CGAGATGGTG TCGAGGTGAA GAGCAAGGGG AAGGGGCGCA GAGTTGATGA GGTTCCCGCT GACTATGGTG CGCTTAATCA AGCTGAGATT GCCGCACAGA TGAAAGTGCT GGAGCAAAAG ATGTACCAGC ATGCGCGTGA TTTGGAGTTT GAGGATGCGG CGCGTATTCG CGATCAAATT CAGCGGCTTA GGGAGGCTGG TCTGGGTTAA
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Protein sequence | MTGLFQLVSS YSPSGDQPAA VQKLVTNFHA GIAKQVLLGV TGSGKTYTIA NVVEQIQKPT LVMAPNKTLA AQLYGEFKAF FPHNAVEYFV SYYDYYQPEA YVPASDTFIE KDSSINEYIE QMRLAATKAL LSRSDVLVVA TVSAIYGLGA PEDYLSLRLI LSLGEHIEQR QLIRHLTELQ YTRNELDLVR GSFRVRGEVV DVFPAESEME ALRIELFDGE IESLSLFDPL TGQTVRKLQR FSVYPKTHYA TTRERTLSAV DTIKDELKEY LELLYGRNKL VEAQRLAQRT QFDLEMMAEV GYCNGIENYS RHLTGKAPGE PPPTLFDYLP PDALLVIDES HVTIPQIGAM FKGDRSRKET LVEFGFRLPS ALDNRPLRFE EWEVRSPRSI YVSATPGSYE FRESAGEVIE LLVRPTGLID PEIEIRPVAT QVDDLISQIN ACIKLGDRVL VTTLTKRMAE NLTEYLSEQG IRIRYLHSEI DTVERVEIIR DLRLGKFDVL VGINLLREGL DMPEVSLVAI LDADKEGFLR STSSLIQTIG RAARSVRGRA ILYADKVTRS MRAAIDETER RRQKQKEYNA ENGIVPKSVV RPISDILEGA RDGVEVKSKG KGRRVDEVPA DYGALNQAEI AAQMKVLEQK MYQHARDLEF EDAARIRDQI QRLREAGLG
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