| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1779 |
|---|
| Symbol | |
|---|
| ID | 6202885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1971938 |
|---|
| End bp | 1974523 |
|---|
| Gene Length | 2586 bp |
|---|
| Protein Length | 861 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641703290 |
|---|
| Product | ATP-dependent chaperone ClpB |
|---|
| Protein accession | YP_001830456 |
|---|
| Protein GI | 182682296 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.772911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATGG ATAAGCTTAC TTCGCGTTTC CAGAATGCGT TGGCTGATGC GCAATCGCTG
GCCGTCGGTC GTGACCATAC TATTATTGAG CCGGTGCATG TTTTTTCGGT ATTGCTTGAT
CAGCAGGGGG GGAGTACACG TCCGTTGCTC GTGCAGGCCG GTGTCAATGT GCCATTGCTG
CGTGAGCGGT TGACCGAGAT ACTTGAGGCA TTGCCGAAAG TGAGTGGTCA GACGGTTAAT
GTCTCACCCA GCAATGAATT GAGTCGTTTG TTTCATCGGA CTGATAAGTT AGCGCAGCAG
CATGGTGATC AGTTTATGGC CAGTGAGTGG TTCGTGTTGG CTGTGGTCGA TGATAGTGGG
GGGCTGGGCC AGGCGTTGCG TGCTGCTGGT GCGGAAAAAA AGAAGATTGA GGCTGCGATT
GATAAATTGC GTGGTGGTGA AACTGTCCAG ACTGAGAATG CGGAGGAGCA GCGTCAAGCG
TTGGAAAAGT ACACGATTGA TCTGACTGCC AGGGCTGAGA GTGGCAAGCT TGATCCGGTG
ATTGGTCGTG ATGAGGAAAT TCGCCGCACG ATACAGGTAT TGCAGCGGCG TACAAAAAAT
AATCCTGTGC TGATTGGTGA GCCGGGTGTG GGTAAAACTG CCATTGTAGA AGGGCTGGCT
CAGCGCATTG TCAATGGTGA GGTTCCGGAA GGGTTGCGCA GTAAGCGTCT GCTCTCGCTG
GATTTGGGGG CGTTGATTGC TGGGGCCAAG TTTCGTGGTG AGTTCGAGGA GCGCTTGAAG
GGGGTGCTTA ACGATCTCGC TAAGAATGAG GGGCGGGTCA TTTTGTTCAT TGACGAGCTG
CATACCATGG TTGGTGCCGG TAAAGCCGAG GGTGCGATGG ATGCTGGCAA TATGCTCAAG
CCGGCGTTAG CACGTGGTGA GTTGCATTGT ATCGGTGCGA CTACGTTGGA TGAGTATCGC
AAGTACATTG AGAAGGATGC GGCGTTGGAA CGCCGTTTCC AGAAGGTGTT TGTTGGGGAG
CCGACGGTGG AGGATACCAT CGCAATTCTT CGTGGACTTA AGGAAAAGTA TGCGTTGCAC
CACGGTGTGG AAATCACTGA TCCGGCTATT GTTGCTGCGG CTACGCTGTC TAATCGCTAC
ATCACTGATC GTCAGTTACC AGATAAAGCG ATTGACTTGA TGGATGAGGC TGCCAGTCGT
ATTCGTATGG AAATTGACTC CAAGCCGGAA GAGCTTGATC GTTTGGAGCG TCGGTTGATT
CAGTTGAAAA TTCAGCGTGA GATGCTGAAG AAAGAAAAGG ATGAGGCGAG CAAGCAGCGT
TTAGTCGATC TTGAGCGTGA TATTGAGGTT CTGGACCGTG AATTTTCCGA TCTGGAGGAG
GTGTGGAGAT CAGAAAAAGC CGCGCTACAG GGGGCGACTA AGATCAAGGA GTCAATCGAG
CAGGCCAAGC TTGATTTGGA AGCCGCGCAG CGCCGTCAGG ACTACGCCAA GATGAGCGAG
ATTCAGTATG GTGTACTCCC CGCGTTGGAG AAGCAGCTAG TGGCAGCAAG TCAGGCGGAA
CAGCACGATT TTACTTTGGT GCAGGAGAAA GTGACTGCTG AGGAGATTGC CGAGGTAGTC
AGTCGTTGGA CTGGTATTCC AGTGAGCAAG ATGCTTGAGG GCGAGCGCGA TAAGTTGTTG
CGTATGGAAG CTGATCTAGG TCGACGTGTG GTTGGTCAAG ATGAGGCGAT CAAGGTGGTA
TCGGATGCGG TGCGCCGTTC GCGTACTGGT TTGTCTGATC CAAATCGACC GAGCGGCTCG
TTCCTTTTTC TGGGTCCGAC GGGTGTTGGT AAGACTGAGT TATGTAAGGC GCTGGCTGAA
TTTTTGTTCG ACAGTCAAGA TGCAATGGTC CGCATTGATA TGAGTGAGTT CATGGAAAAA
CATTCTGTGG CGCGCCTGAT TGGTGCGCCT CCGGGCTATG TGGGTTATGA GGAAGGAGGT
TATCTTACTG AATTGGTGCG ACGTCGGCCT TACTCTCTGA TTCTTTTGGA TGAAGTGGAG
AAGGCGCATA GTGATGTGTT CAATATTCTG CTGCAAGTAC TTGATGATGG ACGCTTGACT
GATGGTCAGG GCCGTACTGT TGATTTTCGC AATACCGTTA TTGTGATGAC ATCAAACTTA
GGTTCACATC AGATCCAAGA ACTCAGTGGA GACGATTCTC CGGAGGTGTA TACGCAAATG
AAGGCGGCAG TGATGGGGGT GGTGCAGGCG CATTTTCGCC CAGAATTCAT TAACAGGTTG
GATGATATTG TTGTTTTCCA CCCGTTGGAC AAGGCGCAAA TCAAGCAGAT TGCGCGGATT
CAACTGCGGG GGCTAGAGAA GCGTCTCGCT GAATCTGAGT TGAAACTAGA TTTGGATGAT
CGTGCGCTGG AATTGCTTGG TAATGTCGGA TTTGATCCTG TATATGGTGC CCGCCCGCTG
AAGAGAGCAA TCCAATCTCA GCTGGAGAAT GCCTTAGCGC AGCAGATCTT AGCTGGAGCG
TTCGTCAGTG GAGATACTGT GCAGGTGGGT GTTGATGGAG GGAAGCTTGT ATTCTCTAAG
GTGTGA
|
|---|
| Protein sequence | MRMDKLTSRF QNALADAQSL AVGRDHTIIE PVHVFSVLLD QQGGSTRPLL VQAGVNVPLL
RERLTEILEA LPKVSGQTVN VSPSNELSRL FHRTDKLAQQ HGDQFMASEW FVLAVVDDSG
GLGQALRAAG AEKKKIEAAI DKLRGGETVQ TENAEEQRQA LEKYTIDLTA RAESGKLDPV
IGRDEEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GLRSKRLLSL
DLGALIAGAK FRGEFEERLK GVLNDLAKNE GRVILFIDEL HTMVGAGKAE GAMDAGNMLK
PALARGELHC IGATTLDEYR KYIEKDAALE RRFQKVFVGE PTVEDTIAIL RGLKEKYALH
HGVEITDPAI VAAATLSNRY ITDRQLPDKA IDLMDEAASR IRMEIDSKPE ELDRLERRLI
QLKIQREMLK KEKDEASKQR LVDLERDIEV LDREFSDLEE VWRSEKAALQ GATKIKESIE
QAKLDLEAAQ RRQDYAKMSE IQYGVLPALE KQLVAASQAE QHDFTLVQEK VTAEEIAEVV
SRWTGIPVSK MLEGERDKLL RMEADLGRRV VGQDEAIKVV SDAVRRSRTG LSDPNRPSGS
FLFLGPTGVG KTELCKALAE FLFDSQDAMV RIDMSEFMEK HSVARLIGAP PGYVGYEEGG
YLTELVRRRP YSLILLDEVE KAHSDVFNIL LQVLDDGRLT DGQGRTVDFR NTVIVMTSNL
GSHQIQELSG DDSPEVYTQM KAAVMGVVQA HFRPEFINRL DDIVVFHPLD KAQIKQIARI
QLRGLEKRLA ESELKLDLDD RALELLGNVG FDPVYGARPL KRAIQSQLEN ALAQQILAGA
FVSGDTVQVG VDGGKLVFSK V
|
|---|
| |